Analysis of interatomic Contacts of Structural Units in PDB entry:
5I1U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5I1U entry

There are 2 chains in PDB entry 5I1U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1THR 310
B
 SER 6HIS 309
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 36 helices in PDB entry 5I1U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 33Right-handed alpha
Helix 2
AA2
A
33 38Right-handed alpha
Helix 3
AA3
A
41 49Right-handed alpha
Helix 4
AA4
A
49 58Right-handed alpha
Helix 5
AA5
A
62 82Right-handed alpha
Helix 6
AA6
A
83 84Right-handed 310
Helix 7
AA7
A
85 89Right-handed 310
Helix 8
AA8
A
90 106Right-handed alpha
Helix 9
AA9
A
114 129Right-handed alpha
Helix 10
AB1
A
132 149Right-handed alpha
Helix 11
AB2
A
149 156Right-handed alpha
Helix 12
AB3
A
164 176Right-handed alpha
Helix 13
AB4
A
177 190Right-handed alpha
Helix 14
AB5
A
194 199Right-handed alpha
Helix 15
AB6
A
200 223Right-handed alpha
Helix 16
AB7
A
234 244Right-handed alpha
Helix 17
AB8
A
246 271Right-handed alpha
Helix 18
AB9
A
271 279Right-handed alpha
Helix 19
AC1
A
282 310Right-handed alpha
Helix 20
AC2
B
18 33Right-handed alpha
Helix 21
AC3
B
33 38Right-handed alpha
Helix 22
AC4
B
41 47Right-handed alpha
Helix 23
AC5
B
49 58Right-handed alpha
Helix 24
AC6
B
62 82Right-handed alpha
Helix 25
AC7
B
90 106Right-handed alpha
Helix 26
AC8
B
114 129Right-handed alpha
Helix 27
AC9
B
132 149Right-handed alpha
Helix 28
AD1
B
149 157Right-handed alpha
Helix 29
AD2
B
164 176Right-handed alpha
Helix 30
AD3
B
177 190Right-handed alpha
Helix 31
AD4
B
194 199Right-handed alpha
Helix 32
AD5
B
200 222Right-handed alpha
Helix 33
AD6
B
234 244Right-handed alpha
Helix 34
AD7
B
246 271Right-handed alpha
Helix 35
AD8
B
271 279Right-handed alpha
Helix 36
AD9
B
282 309Right-handed alpha
Back to top of page
There are no sheets in PDB entry 5I1U
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il