Analysis of interatomic Contacts of Structural Units in PDB entry:
5I2G

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5I2G entry

There are 2 chains in PDB entry 5I2G (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 3	GLN 839
B	TYR 4	GLN 839

There are 79 helices in PDB entry 5I2G. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	13	23	Right-handed alpha
Helix 2	AA2	A	31	45	Right-handed alpha
Helix 3	AA3	A	48	64	Right-handed alpha
Helix 4	AA4	A	93	99	Right-handed alpha
Helix 5	AA5	A	114	126	Right-handed alpha
Helix 6	AA6	A	127	129	Right-handed 310
Helix 7	AA7	A	132	141	Right-handed alpha
Helix 8	AA8	A	142	151	Right-handed alpha
Helix 9	AA9	A	156	162	Right-handed alpha
Helix 10	AB1	A	170	191	Right-handed alpha
Helix 11	AB2	A	199	234	Right-handed alpha
Helix 12	AB3	A	237	254	Right-handed alpha
Helix 13	AB4	A	261	280	Right-handed alpha
Helix 14	AB5	A	289	294	Right-handed alpha
Helix 15	AB6	A	294	304	Right-handed alpha
Helix 16	AB7	A	308	326	Right-handed alpha
Helix 17	AB8	A	331	338	Right-handed alpha
Helix 18	AB9	A	361	375	Right-handed alpha
Helix 19	AC1	A	390	403	Right-handed alpha
Helix 20	AC2	A	413	423	Right-handed alpha
Helix 21	AC3	A	426	432	Right-handed alpha
Helix 22	AC4	A	458	467	Right-handed alpha
Helix 23	AC5	A	482	486	Right-handed 310
Helix 24	AC6	A	488	522	Right-handed alpha
Helix 25	AC7	A	524	530	Right-handed alpha
Helix 26	AC8	A	533	538	Right-handed alpha
Helix 27	AC9	A	540	544	Right-handed 310
Helix 28	AD1	A	557	572	Right-handed alpha
Helix 29	AD2	A	579	589	Right-handed alpha
Helix 30	AD3	A	590	593	Right-handed 310
Helix 31	AD4	A	637	652	Right-handed alpha
Helix 32	AD5	A	660	679	Right-handed alpha
Helix 33	AD6	A	698	705	Right-handed alpha
Helix 34	AD7	A	732	742	Right-handed alpha
Helix 35	AD8	A	761	764	Right-handed 310
Helix 36	AD9	A	765	782	Right-handed alpha
Helix 37	AE1	A	794	804	Right-handed alpha
Helix 38	AE2	A	805	808	Right-handed 310
Helix 39	AE3	A	823	825	Right-handed 310
Helix 40	AE4	A	826	836	Right-handed alpha
Helix 41	AE5	B	13	23	Right-handed alpha
Helix 42	AE6	B	31	43	Right-handed alpha
Helix 43	AE7	B	48	64	Right-handed alpha
Helix 44	AE8	B	93	99	Right-handed alpha
Helix 45	AE9	B	114	126	Right-handed alpha
Helix 46	AF1	B	127	129	Right-handed 310
Helix 47	AF2	B	132	141	Right-handed alpha
Helix 48	AF3	B	142	151	Right-handed alpha
Helix 49	AF4	B	156	162	Right-handed alpha
Helix 50	AF5	B	170	191	Right-handed alpha
Helix 51	AF6	B	199	234	Right-handed alpha
Helix 52	AF7	B	237	254	Right-handed alpha
Helix 53	AF8	B	261	280	Right-handed alpha
Helix 54	AF9	B	289	294	Right-handed alpha
Helix 55	AG1	B	294	304	Right-handed alpha
Helix 56	AG2	B	308	324	Right-handed alpha
Helix 57	AG3	B	331	336	Right-handed alpha
Helix 58	AG4	B	361	375	Right-handed alpha
Helix 59	AG5	B	390	403	Right-handed alpha
Helix 60	AG6	B	413	423	Right-handed alpha
Helix 61	AG7	B	426	432	Right-handed alpha
Helix 62	AG8	B	458	468	Right-handed alpha
Helix 63	AG9	B	482	486	Right-handed 310
Helix 64	AH1	B	488	522	Right-handed alpha
Helix 65	AH2	B	524	529	Right-handed alpha
Helix 66	AH3	B	533	538	Right-handed alpha
Helix 67	AH4	B	557	573	Right-handed alpha
Helix 68	AH5	B	579	589	Right-handed alpha
Helix 69	AH6	B	590	593	Right-handed 310
Helix 70	AH7	B	636	653	Right-handed alpha
Helix 71	AH8	B	660	679	Right-handed alpha
Helix 72	AH9	B	698	705	Right-handed alpha
Helix 73	AI1	B	733	742	Right-handed alpha
Helix 74	AI2	B	761	764	Right-handed 310
Helix 75	AI3	B	765	783	Right-handed alpha
Helix 76	AI4	B	794	804	Right-handed alpha
Helix 77	AI5	B	805	808	Right-handed 310
Helix 78	AI6	B	823	825	Right-handed 310
Helix 79	AI7	B	826	836	Right-handed alpha

There are 14 sheets in PDB entry 5I2G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	154	155	first strand
Strand 2	A	454	457	anti-parallel
Strand 3	A	553	556	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	165	167	first strand
Strand 2	A	283	285	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	346	350	first strand
Strand 2	A	380	385	parallel
Strand 3	A	409	412	parallel
Strand 4	A	787	792	anti-parallel
Strand 5	A	756	759	parallel
Strand 6	A	838	839	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	434	436	first strand
Strand 2	A	440	442	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	447	448	first strand
Strand 2	A	548	551	parallel
Strand 3	A	688	689	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	470	471	first strand
Strand 2	A	474	475	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	812	814	first strand
Strand 2	A	819	821	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	154	155	first strand
Strand 2	B	455	457	anti-parallel
Strand 3	B	554	556	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	165	167	first strand
Strand 2	B	283	285	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	346	350	first strand
Strand 2	B	380	385	parallel
Strand 3	B	409	412	parallel
Strand 4	B	787	792	anti-parallel
Strand 5	B	756	759	parallel
Strand 6	B	838	839	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	434	436	first strand
Strand 2	B	440	442	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	447	448	first strand
Strand 2	B	548	551	parallel
Strand 3	B	688	689	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	470	471	first strand
Strand 2	B	474	475	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	812	814	first strand
Strand 2	B	819	821	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5I2G

Analysis of interatomic Contacts of Structural Units in PDB entry:
5I2G