Analysis of interatomic Contacts of Structural Units in PDB entry:
5I62


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5I62 entry

There is 1 chain in PDB entry 5I62 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1ARG 534
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 5I62. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 12Right-handed alpha
Helix 2
AA2
A
16 29Right-handed alpha
Helix 3
AA3
A
43 56Right-handed alpha
Helix 4
AA4
A
57 59Right-handed 310
Helix 5
AA5
A
62 74Right-handed alpha
Helix 6
AA6
A
84 87Right-handed 310
Helix 7
AA7
A
88 98Right-handed alpha
Helix 8
AA8
A
99 101Right-handed 310
Helix 9
AA9
A
107 117Right-handed alpha
Helix 10
AB1
A
128 136Right-handed alpha
Helix 11
AB2
A
149 158Right-handed alpha
Helix 12
AB3
A
194 198Right-handed 310
Helix 13
AB4
A
207 229Right-handed alpha
Helix 14
AB5
A
231 235Right-handed 310
Helix 15
AB6
A
236 251Right-handed alpha
Helix 16
AB7
A
265 269Right-handed 310
Helix 17
AB8
A
270 285Right-handed alpha
Helix 18
AB9
A
287 297Right-handed alpha
Helix 19
AC1
A
298 303Right-handed 310
Helix 20
AC2
A
326 346Right-handed alpha
Helix 21
AC3
A
369 379Right-handed alpha
Helix 22
AC4
A
385 389Right-handed 310
Helix 23
AC5
A
418 427Right-handed alpha
Helix 24
AC6
A
434 439Right-handed alpha
Helix 25
AC7
A
440 452Right-handed alpha
Helix 26
AC8
A
453 455Right-handed 310
Helix 27
AC9
A
459 470Right-handed alpha
Helix 28
AD1
A
473 477Right-handed 310
Helix 29
AD2
A
482 484Right-handed 310
Helix 30
AD3
A
485 492Right-handed alpha
Helix 31
AD4
A
520 523Right-handed 310
Helix 32
AD5
A
524 533Right-handed alpha
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There are 5 sheets in PDB entry 5I62. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 35first strand
Strand 2
A
428 429anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 165first strand
Strand 2
A
168 173anti-parallel
Strand 3
A
176 180anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
199 205first strand
Strand 2
A
182 189anti-parallel
Strand 3
A
306 309parallel
Strand 4
A
312 314anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
355 357first strand
Strand 2
A
360 363anti-parallel
Strand 3
A
257 261anti-parallel
Strand 4
A
390 392anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
395 398first strand
Strand 2
A
401 404anti-parallel
Strand 3
A
416 417anti-parallel
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