Analysis of interatomic Contacts of Structural Units in PDB entry:
5I67


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5I67 entry

There is 1 chain in PDB entry 5I67 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 8GLY 605
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 5I67. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 31Right-handed alpha
Helix 2
AA2
A
41 55Right-handed alpha
Helix 3
AA3
A
82 84Right-handed 310
Helix 4
AA4
A
92 96Right-handed 310
Helix 5
AA5
A
104 117Right-handed alpha
Helix 6
AA6
A
149 160Right-handed alpha
Helix 7
AA7
A
163 171Right-handed alpha
Helix 8
AA8
A
220 224Right-handed 310
Helix 9
AA9
A
233 244Right-handed alpha
Helix 10
AB1
A
274 280Right-handed alpha
Helix 11
AB2
A
328 337Right-handed alpha
Helix 12
AB3
A
394 396Right-handed 310
Helix 13
AB4
A
400 405Right-handed 310
Helix 14
AB5
A
432 442Right-handed alpha
Helix 15
AB6
A
462 465Right-handed 310
Helix 16
AB7
A
472 486Right-handed alpha
Helix 17
AB8
A
513 516Right-handed 310
Helix 18
AB9
A
517 529Right-handed alpha
Helix 19
AC1
A
544 548Right-handed 310
Helix 20
AC2
A
556 564Right-handed alpha
Helix 21
AC3
A
567 586Right-handed alpha
Helix 22
AC4
A
587 589Right-handed 310
Helix 23
AC5
A
590 605Right-handed alpha
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There are 8 sheets in PDB entry 5I67. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 37first strand
Strand 2
A
124 132parallel
Strand 3
A
141 147anti-parallel
Strand 4
A
177 182parallel
Strand 5
A
212 216parallel
Strand 6
A
203 207anti-parallel
Strand 7
A
86 88parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 37first strand
Strand 2
A
124 132parallel
Strand 3
A
161 162anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 60first strand
Strand 2
A
70 72anti-parallel
Strand 3
A
341 343parallel
Strand 4
A
388 392anti-parallel
Strand 5
A
315 319anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
246 248first strand
Strand 2
A
298 302anti-parallel
Strand 3
A
307 310anti-parallel
Strand 4
A
409 417anti-parallel
Strand 5
A
262 268parallel
Strand 6
A
251 256anti-parallel
Strand 7
A
289 295anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
246 248first strand
Strand 2
A
298 302anti-parallel
Strand 3
A
307 310anti-parallel
Strand 4
A
409 417anti-parallel
Strand 5
A
494 498parallel
Strand 6
A
427 429anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
353 354first strand
Strand 2
A
346 348anti-parallel
Strand 3
A
364 366anti-parallel
Strand 4
A
372 374anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
444 445first strand
Strand 2
A
459 460anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
535 537first strand
Strand 2
A
540 542anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il