Analysis of interatomic Contacts of Structural Units in PDB entry:
5I68


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5I68 entry

There is 1 chain in PDB entry 5I68 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2PHE 663
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 5I68. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 30Right-handed alpha
Helix 2
AA2
A
46 51Right-handed alpha
Helix 3
AA3
A
52 60Right-handed 310
Helix 4
AA4
A
74 78Right-handed 310
Helix 5
AA5
A
91 96Right-handed 310
Helix 6
AA6
A
105 112Right-handed alpha
Helix 7
AA7
A
118 128Right-handed alpha
Helix 8
AA8
A
158 169Right-handed alpha
Helix 9
AA9
A
203 209Right-handed alpha
Helix 10
AB1
A
209 216Right-handed alpha
Helix 11
AB2
A
268 280Right-handed alpha
Helix 12
AB3
A
284 290Right-handed alpha
Helix 13
AB4
A
324 328Right-handed 310
Helix 14
AB5
A
334 346Right-handed alpha
Helix 15
AB6
A
349 353Right-handed 310
Helix 16
AB7
A
365 370Right-handed alpha
Helix 17
AB8
A
373 384Right-handed alpha
Helix 18
AB9
A
404 408Right-handed 310
Helix 19
AC1
A
449 452Right-handed 310
Helix 20
AC2
A
453 468Right-handed alpha
Helix 21
AC3
A
478 481Right-handed 310
Helix 22
AC4
A
496 505Right-handed alpha
Helix 23
AC5
A
547 562Right-handed alpha
Helix 24
AC6
A
605 609Right-handed 310
Helix 25
AC7
A
617 636Right-handed alpha
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There are 7 sheets in PDB entry 5I68. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
219 222first strand
Strand 2
A
34 37parallel
Strand 3
A
6 12parallel
Strand 4
A
256 266parallel
Strand 5
A
239 244anti-parallel
Strand 6
A
225 227anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
219 222first strand
Strand 2
A
34 37parallel
Strand 3
A
6 12parallel
Strand 4
A
256 266parallel
Strand 5
A
601 603parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 70first strand
Strand 2
A
83 84anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 132first strand
Strand 2
A
148 150parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
188 189first strand
Strand 2
A
356 362anti-parallel
Strand 3
A
393 398anti-parallel
Strand 4
A
413 420anti-parallel
Strand 5
A
310 318anti-parallel
Strand 6
A
473 476anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
188 189first strand
Strand 2
A
356 362anti-parallel
Strand 3
A
393 398anti-parallel
Strand 4
A
413 420anti-parallel
Strand 5
A
310 318anti-parallel
Strand 6
A
563 564anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
304 306first strand
Strand 2
A
427 430anti-parallel
Strand 3
A
441 443anti-parallel
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