Analysis of interatomic Contacts of Structural Units in PDB entry:
5I6E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5I6E entry


Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 2 chains in PDB entry 5I6E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 790VAL 1156
A
 VAL 1158TRP 1492
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 5I6E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
796 815Right-handed alpha
Helix 2
AA2
A
821 834Right-handed alpha
Helix 3
AA3
A
837 851Right-handed alpha
Helix 4
AA4
A
855 873Right-handed alpha
Helix 5
AA5
A
877 891Right-handed alpha
Helix 6
AA6
A
899 904Right-handed alpha
Helix 7
AA7
A
904 914Right-handed alpha
Helix 8
AA8
A
917 938Right-handed alpha
Helix 9
AA9
A
939 941Right-handed 310
Helix 10
AB1
A
946 958Right-handed alpha
Helix 11
AB2
A
962 974Right-handed alpha
Helix 12
AB3
A
974 996Right-handed alpha
Helix 13
AB4
A
996 1012Right-handed alpha
Helix 14
AB5
A
1018 1031Right-handed alpha
Helix 15
AB6
A
1033 1053Right-handed alpha
Helix 16
AB7
A
1068 1077Right-handed alpha
Helix 17
AB8
A
1082 1087Right-handed alpha
Helix 18
AB9
A
1088 1090Right-handed 310
Helix 19
AC1
A
1094 1110Right-handed alpha
Helix 20
AC2
A
1137 1141Right-handed 310
Helix 21
AC3
A
1185 1194Right-handed alpha
Helix 22
AC4
A
1234 1249Right-handed alpha
Helix 23
AC5
A
1249 1254Right-handed alpha
Helix 24
AC6
A
1287 1290Right-handed 310
Helix 25
AC7
A
1293 1300Right-handed 310
Helix 26
AC8
A
1352 1375Right-handed alpha
Helix 27
AC9
A
1396 1404Right-handed alpha
Helix 28
AD1
A
1411 1418Right-handed alpha
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There are 3 sheets in PDB entry 5I6E. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1114 1121first strand
Strand 2
A
1128 1134anti-parallel
Strand 3
A
1173 1182anti-parallel
Strand 4
A
1220 1228parallel
Strand 5
A
1258 1265parallel
Strand 6
A
1274 1279anti-parallel
Strand 7
A
1284 1285anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1308 1313first strand
Strand 2
A
1320 1327anti-parallel
Strand 3
A
1334 1342anti-parallel
Strand 4
A
1383 1393parallel
Strand 5
A
1420 1430parallel
Strand 6
A
1437 1445anti-parallel
Strand 7
A
1453 1458anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1460 1461first strand
Strand 2
A
1467 1468anti-parallel
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