Analysis of interatomic Contacts of Structural Units in PDB entry:
5I7D


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5I7D entry

There are 2 chains in PDB entry 5I7D (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 8SER 481
B
 LYS 8SER 481
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 5I7D. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 74Right-handed alpha
Helix 2
AA2
A
93 123Right-handed alpha
Helix 3
AA3
A
124 189Right-handed alpha
Helix 4
AA4
A
227 232Right-handed alpha
Helix 5
AA5
A
233 270Right-handed alpha
Helix 6
AA6
A
270 279Right-handed alpha
Helix 7
AA7
A
283 319Right-handed alpha
Helix 8
AA8
A
321 333Right-handed alpha
Helix 9
AA9
A
362 386Right-handed alpha
Helix 10
AB1
A
388 403Right-handed alpha
Helix 11
AB2
A
435 478Right-handed alpha
Helix 12
AB3
B
9 76Right-handed alpha
Helix 13
AB4
B
93 123Right-handed alpha
Helix 14
AB5
B
124 188Right-handed alpha
Helix 15
AB6
B
227 232Right-handed alpha
Helix 16
AB7
B
233 270Right-handed alpha
Helix 17
AB8
B
270 279Right-handed alpha
Helix 18
AB9
B
283 318Right-handed alpha
Helix 19
AC1
B
321 333Right-handed alpha
Helix 20
AC2
B
363 386Right-handed alpha
Helix 21
AC3
B
388 403Right-handed alpha
Helix 22
AC4
B
435 478Right-handed alpha
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There are no sheets in PDB entry 5I7D
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il