Analysis of interatomic Contacts of Structural Units in PDB entry:
5I7N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5I7N entry

There is 1 chain in PDB entry 5I7N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 9SER 342
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 5I7N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
28 37Right-handed alpha
Helix 2
2
A
43 45Right-handed 310
Helix 3
3
A
48 54Right-handed alpha
Helix 4
4
A
63 79Right-handed 310
Helix 5
5
A
151 153Right-handed 310
Helix 6
6
A
158 165Right-handed alpha
Helix 7
7
A
207 209Right-handed 310
Helix 8
8
A
225 234Right-handed alpha
Helix 9
9
A
240 242Right-handed 310
Helix 10
10
A
245 250Right-handed alpha
Helix 11
11
A
260 275Right-handed alpha
Helix 12
12
A
278 280Right-handed 310
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There is 1 sheet ( A) in PDB entry 5I7N.

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 19first strand
Strand 2
A
108 119anti-parallel
Strand 3
A
122 132anti-parallel
Strand 4
A
138 149anti-parallel
Strand 5
A
87 97anti-parallel
Strand 6
A
281 287anti-parallel
Strand 7
A
335 340anti-parallel
Strand 8
A
317 325anti-parallel
Strand 9
A
300 312anti-parallel
Strand 10
A
219 223anti-parallel
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