Analysis of interatomic Contacts of Structural Units in PDB entry:
5I7O

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5I7O entry

There are 4 chains in PDB entry 5I7O (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 3	TYR 306
B	ALA 2	SER 309
C	ALA 2	TYR 306
D	ARG 3	ALA 323

There are 49 helices in PDB entry 5I7O. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	51	66	Right-handed alpha
Helix 2	AA2	A	80	94	Right-handed alpha
Helix 3	AA3	A	106	116	Right-handed alpha
Helix 4	AA4	A	133	143	Right-handed alpha
Helix 5	AA5	A	154	163	Right-handed alpha
Helix 6	AA6	A	164	173	Right-handed alpha
Helix 7	AA7	A	186	200	Right-handed alpha
Helix 8	AA8	A	243	259	Right-handed alpha
Helix 9	AA9	A	263	284	Right-handed alpha
Helix 10	AB1	A	297	304	Right-handed 310
Helix 11	AB2	B	6	10	Right-handed 310
Helix 12	AB3	B	51	65	Right-handed alpha
Helix 13	AB4	B	80	94	Right-handed alpha
Helix 14	AB5	B	106	116	Right-handed alpha
Helix 15	AB6	B	124	126	Right-handed 310
Helix 16	AB7	B	127	143	Right-handed alpha
Helix 17	AB8	B	150	153	Right-handed 310
Helix 18	AB9	B	154	164	Right-handed alpha
Helix 19	AC1	B	164	173	Right-handed alpha
Helix 20	AC2	B	186	200	Right-handed alpha
Helix 21	AC3	B	232	236	Right-handed 310
Helix 22	AC4	B	243	259	Right-handed alpha
Helix 23	AC5	B	263	283	Right-handed alpha
Helix 24	AC6	B	297	304	Right-handed 310
Helix 25	AC7	C	6	10	Right-handed 310
Helix 26	AC8	C	51	65	Right-handed alpha
Helix 27	AC9	C	80	94	Right-handed alpha
Helix 28	AD1	C	106	116	Right-handed alpha
Helix 29	AD2	C	124	127	Right-handed 310
Helix 30	AD3	C	128	143	Right-handed alpha
Helix 31	AD4	C	154	164	Right-handed alpha
Helix 32	AD5	C	164	173	Right-handed alpha
Helix 33	AD6	C	186	200	Right-handed alpha
Helix 34	AD7	C	232	236	Right-handed 310
Helix 35	AD8	C	243	259	Right-handed alpha
Helix 36	AD9	C	263	284	Right-handed alpha
Helix 37	AE1	C	296	304	Right-handed 310
Helix 38	AE2	D	51	65	Right-handed alpha
Helix 39	AE3	D	80	94	Right-handed alpha
Helix 40	AE4	D	106	117	Right-handed alpha
Helix 41	AE5	D	131	143	Right-handed alpha
Helix 42	AE6	D	154	164	Right-handed alpha
Helix 43	AE7	D	164	173	Right-handed alpha
Helix 44	AE8	D	186	198	Right-handed alpha
Helix 45	AE9	D	232	236	Right-handed 310
Helix 46	AF1	D	243	259	Right-handed alpha
Helix 47	AF2	D	263	283	Right-handed alpha
Helix 48	AF3	D	297	304	Right-handed 310
Helix 49	AF4	D	312	316	Right-handed 310

There are 9 sheets in PDB entry 5I7O. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	238	242	first strand
Strand 2	A	204	210	parallel
Strand 3	A	178	182	parallel
Strand 4	A	287	293	parallel
Strand 5	A	35	41	parallel
Strand 6	A	16	18	anti-parallel
Strand 7	B	3	4	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	119	120	first strand
Strand 2	A	96	100	parallel
Strand 3	A	73	77	parallel
Strand 4	A	147	148	parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	16	19	first strand
Strand 2	B	35	41	anti-parallel
Strand 3	B	287	293	parallel
Strand 4	B	178	182	parallel
Strand 5	B	204	210	parallel
Strand 6	B	238	242	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	119	123	first strand
Strand 2	B	96	102	parallel
Strand 3	B	73	77	parallel
Strand 4	B	147	148	parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	16	19	first strand
Strand 2	C	35	41	anti-parallel
Strand 3	C	287	293	parallel
Strand 4	C	178	182	parallel
Strand 5	C	204	210	parallel
Strand 6	C	238	242	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	119	123	first strand
Strand 2	C	96	102	parallel
Strand 3	C	73	77	parallel
Strand 4	C	147	148	parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	16	18	first strand
Strand 2	D	35	41	anti-parallel
Strand 3	D	287	293	parallel
Strand 4	D	178	182	parallel
Strand 5	D	204	210	parallel
Strand 6	D	238	242	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	119	123	first strand
Strand 2	D	96	102	parallel
Strand 3	D	73	77	parallel
Strand 4	D	147	148	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	219	220	first strand
Strand 2	D	321	322	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5I7O

Analysis of interatomic Contacts of Structural Units in PDB entry:
5I7O