Analysis of interatomic Contacts of Structural Units in PDB entry:
5I7V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5I7V entry

There are 3 chains in PDB entry 5I7V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2MET 258
B
 GLY 2MET 258
C
 GLY 2MET 258
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 5I7V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 30Right-handed alpha
Helix 2
AA2
A
44 55Right-handed alpha
Helix 3
AA3
A
67 82Right-handed alpha
Helix 4
AA4
A
96 101Right-handed 310
Helix 5
AA5
A
109 121Right-handed alpha
Helix 6
AA6
A
122 132Right-handed alpha
Helix 7
AA7
A
148 150Right-handed 310
Helix 8
AA8
A
157 179Right-handed alpha
Helix 9
AA9
A
195 200Right-handed 310
Helix 10
AB1
A
202 214Right-handed alpha
Helix 11
AB2
A
221 234Right-handed alpha
Helix 12
AB3
A
235 238Right-handed 310
Helix 13
AB4
A
250 254Right-handed 310
Helix 14
AB5
B
19 30Right-handed alpha
Helix 15
AB6
B
44 54Right-handed alpha
Helix 16
AB7
B
67 82Right-handed alpha
Helix 17
AB8
B
96 101Right-handed 310
Helix 18
AB9
B
104 108Right-handed 310
Helix 19
AC1
B
109 121Right-handed alpha
Helix 20
AC2
B
122 132Right-handed alpha
Helix 21
AC3
B
146 150Right-handed 310
Helix 22
AC4
B
157 179Right-handed alpha
Helix 23
AC5
B
195 200Right-handed 310
Helix 24
AC6
B
202 214Right-handed alpha
Helix 25
AC7
B
221 234Right-handed alpha
Helix 26
AC8
B
235 238Right-handed 310
Helix 27
AC9
B
250 254Right-handed 310
Helix 28
AD1
C
19 30Right-handed alpha
Helix 29
AD2
C
44 55Right-handed alpha
Helix 30
AD3
C
67 82Right-handed alpha
Helix 31
AD4
C
96 101Right-handed 310
Helix 32
AD5
C
109 121Right-handed alpha
Helix 33
AD6
C
122 132Right-handed alpha
Helix 34
AD7
C
148 150Right-handed 310
Helix 35
AD8
C
157 179Right-handed alpha
Helix 36
AD9
C
195 200Right-handed 310
Helix 37
AE1
C
202 214Right-handed alpha
Helix 38
AE2
C
221 234Right-handed alpha
Helix 39
AE3
C
235 238Right-handed 310
Helix 40
AE4
C
250 254Right-handed 310
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There are 3 sheets in PDB entry 5I7V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 62first strand
Strand 2
A
34 39parallel
Strand 3
A
8 11parallel
Strand 4
A
85 90parallel
Strand 5
A
135 146parallel
Strand 6
A
183 189parallel
Strand 7
A
244 247parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 62first strand
Strand 2
B
34 39parallel
Strand 3
B
8 11parallel
Strand 4
B
85 90parallel
Strand 5
B
135 145parallel
Strand 6
B
183 189parallel
Strand 7
B
244 247parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
60 62first strand
Strand 2
C
34 39parallel
Strand 3
C
8 11parallel
Strand 4
C
85 90parallel
Strand 5
C
135 146parallel
Strand 6
C
183 189parallel
Strand 7
C
244 247parallel
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