Analysis of interatomic Contacts of Structural Units in PDB entry:
5I7W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5I7W entry

There are 4 chains in PDB entry 5I7W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1VAL 41
A
 ASP 43GLY 342
B
 PHE 2VAL 41
B
 ASP 43GLY 342
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 5I7W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 9Right-handed 310
Helix 2
AA2
A
17 25Right-handed alpha
Helix 3
AA3
A
34 36Right-handed 310
Helix 4
AA4
A
42 56Right-handed alpha
Helix 5
AA5
A
71 85Right-handed alpha
Helix 6
AA6
A
97 108Right-handed alpha
Helix 7
AA7
A
124 138Right-handed alpha
Helix 8
AA8
A
153 162Right-handed alpha
Helix 9
AA9
A
162 171Right-handed alpha
Helix 10
AB1
A
185 199Right-handed alpha
Helix 11
AB2
A
213 221Right-handed alpha
Helix 12
AB3
A
240 244Right-handed 310
Helix 13
AB4
A
255 271Right-handed alpha
Helix 14
AB5
A
275 293Right-handed alpha
Helix 15
AB6
A
306 308Right-handed 310
Helix 16
AB7
A
309 314Right-handed alpha
Helix 17
AB8
A
315 322Right-handed alpha
Helix 18
AB9
A
327 331Right-handed 310
Helix 19
AC1
B
4 9Right-handed 310
Helix 20
AC2
B
17 25Right-handed alpha
Helix 21
AC3
B
34 36Right-handed 310
Helix 22
AC4
B
42 56Right-handed alpha
Helix 23
AC5
B
71 85Right-handed alpha
Helix 24
AC6
B
97 108Right-handed alpha
Helix 25
AC7
B
124 138Right-handed alpha
Helix 26
AC8
B
153 162Right-handed alpha
Helix 27
AC9
B
162 171Right-handed alpha
Helix 28
AD1
B
185 199Right-handed alpha
Helix 29
AD2
B
213 221Right-handed alpha
Helix 30
AD3
B
240 244Right-handed 310
Helix 31
AD4
B
255 271Right-handed alpha
Helix 32
AD5
B
275 293Right-handed alpha
Helix 33
AD6
B
306 310Right-handed 310
Helix 34
AD7
B
315 322Right-handed alpha
Helix 35
AD8
B
327 331Right-handed 310
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There are 4 sheets in PDB entry 5I7W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
14 16first strand
Strand 2
A
27 32anti-parallel
Strand 3
A
297 302parallel
Strand 4
A
177 180parallel
Strand 5
A
203 209parallel
Strand 6
A
250 254parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
110 114first strand
Strand 2
A
87 93parallel
Strand 3
A
64 68parallel
Strand 4
A
144 146parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
14 16first strand
Strand 2
B
27 32anti-parallel
Strand 3
B
297 302parallel
Strand 4
B
177 180parallel
Strand 5
B
203 209parallel
Strand 6
B
250 254parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
110 114first strand
Strand 2
B
87 93parallel
Strand 3
B
64 68parallel
Strand 4
B
144 146parallel
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