Analysis of interatomic Contacts of Structural Units in PDB entry:
5I85


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5I85 entry

There is 1 chain in PDB entry 5I85 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TRP 84MET 611
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 5I85. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
84 86Right-handed 310
Helix 2
AA2
A
87 104Right-handed alpha
Helix 3
AA3
A
105 123Right-handed alpha
Helix 4
AA4
A
127 149Right-handed alpha
Helix 5
AA5
A
152 162Right-handed alpha
Helix 6
AA6
A
253 263Right-handed alpha
Helix 7
AA7
A
264 268Right-handed 310
Helix 8
AA8
A
288 308Right-handed alpha
Helix 9
AA9
A
338 349Right-handed alpha
Helix 10
AB1
A
354 365Right-handed alpha
Helix 11
AB2
A
381 385Right-handed 310
Helix 12
AB3
A
389 394Right-handed 310
Helix 13
AB4
A
398 400Right-handed 310
Helix 14
AB5
A
401 417Right-handed alpha
Helix 15
AB6
A
427 431Right-handed 310
Helix 16
AB7
A
432 446Right-handed alpha
Helix 17
AB8
A
520 525Right-handed alpha
Helix 18
AB9
A
539 544Right-handed alpha
Helix 19
AC1
A
549 563Right-handed alpha
Helix 20
AC2
A
563 575Right-handed alpha
Helix 21
AC3
A
585 597Right-handed alpha
Helix 22
AC4
A
603 608Right-handed 310
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There are 2 sheets in PDB entry 5I85. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
312 314first strand
Strand 2
A
272 275parallel
Strand 3
A
198 204parallel
Strand 4
A
494 501anti-parallel
Strand 5
A
511 518anti-parallel
Strand 6
A
534 538anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
367 372first strand
Strand 2
A
375 379anti-parallel
Strand 3
A
419 423parallel
Strand 4
A
450 455parallel
Strand 5
A
475 481parallel
Strand 6
A
462 467anti-parallel
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