Analysis of interatomic Contacts of Structural Units in PDB entry:
5I92

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5I92 entry

There are 4 chains in PDB entry 5I92 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	LYS 427
B	MET 1	LEU 426
C	MET 1	LEU 426
D	MET 1	TYR 43

There are114 helices in PDB entry 5I92. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	2	12	Right-handed alpha
Helix 2	AA2	A	15	19	Right-handed 310
Helix 3	AA3	A	21	26	Right-handed 310
Helix 4	AA4	A	56	60	Right-handed 310
Helix 5	AA5	A	68	80	Right-handed alpha
Helix 6	AA6	A	89	103	Right-handed alpha
Helix 7	AA7	A	114	131	Right-handed alpha
Helix 8	AA8	A	146	149	Right-handed 310
Helix 9	AA9	A	169	174	Right-handed alpha
Helix 10	AB1	A	183	195	Right-handed alpha
Helix 11	AB2	A	218	231	Right-handed alpha
Helix 12	AB3	A	248	255	Right-handed alpha
Helix 13	AB4	A	266	269	Right-handed 310
Helix 14	AB5	A	279	284	Right-handed alpha
Helix 15	AB6	A	301	315	Right-handed alpha
Helix 16	AB7	A	319	342	Right-handed alpha
Helix 17	AB8	A	367	374	Right-handed alpha
Helix 18	AB9	A	375	389	Right-handed alpha
Helix 19	AC1	A	408	425	Right-handed alpha
Helix 20	AC2	B	2	12	Right-handed alpha
Helix 21	AC3	B	15	19	Right-handed 310
Helix 22	AC4	B	21	26	Right-handed 310
Helix 23	AC5	B	56	60	Right-handed 310
Helix 24	AC6	B	68	80	Right-handed alpha
Helix 25	AC7	B	89	103	Right-handed alpha
Helix 26	AC8	B	114	131	Right-handed alpha
Helix 27	AC9	B	146	149	Right-handed 310
Helix 28	AD1	B	169	174	Right-handed 310
Helix 29	AD2	B	183	195	Right-handed alpha
Helix 30	AD3	B	218	231	Right-handed alpha
Helix 31	AD4	B	248	255	Right-handed alpha
Helix 32	AD5	B	265	269	Right-handed 310
Helix 33	AD6	B	279	284	Right-handed alpha
Helix 34	AD7	B	301	316	Right-handed alpha
Helix 35	AD8	B	319	343	Right-handed alpha
Helix 36	AD9	B	367	373	Right-handed alpha
Helix 37	AE1	B	375	389	Right-handed alpha
Helix 38	AE2	B	408	426	Right-handed alpha
Helix 39	AE3	C	2	12	Right-handed alpha
Helix 40	AE4	C	15	19	Right-handed 310
Helix 41	AE5	C	21	26	Right-handed 310
Helix 42	AE6	C	56	60	Right-handed 310
Helix 43	AE7	C	68	80	Right-handed alpha
Helix 44	AE8	C	89	103	Right-handed alpha
Helix 45	AE9	C	114	131	Right-handed alpha
Helix 46	AF1	C	146	149	Right-handed 310
Helix 47	AF2	C	169	174	Right-handed alpha
Helix 48	AF3	C	183	195	Right-handed alpha
Helix 49	AF4	C	218	231	Right-handed alpha
Helix 50	AF5	C	248	255	Right-handed alpha
Helix 51	AF6	C	266	269	Right-handed 310
Helix 52	AF7	C	279	284	Right-handed alpha
Helix 53	AF8	C	302	315	Right-handed alpha
Helix 54	AF9	C	319	343	Right-handed alpha
Helix 55	AG1	C	367	373	Right-handed alpha
Helix 56	AG2	C	375	389	Right-handed alpha
Helix 57	AG3	C	408	426	Right-handed alpha
Helix 58	AG4	D	2	12	Right-handed alpha
Helix 59	AG5	D	15	19	Right-handed 310
Helix 60	AG6	D	21	26	Right-handed 310
Helix 61	AG7	D	56	60	Right-handed 310
Helix 62	AG8	D	68	80	Right-handed alpha
Helix 63	AG9	D	89	103	Right-handed alpha
Helix 64	AH1	D	114	131	Right-handed alpha
Helix 65	AH2	D	146	149	Right-handed 310
Helix 66	AH3	D	169	174	Right-handed alpha
Helix 67	AH4	D	183	195	Right-handed alpha
Helix 68	AH5	D	218	231	Right-handed alpha
Helix 69	AH6	D	248	255	Right-handed alpha
Helix 70	AH7	D	265	269	Right-handed 310
Helix 71	AH8	D	279	284	Right-handed alpha
Helix 72	AH9	D	301	316	Right-handed alpha
Helix 73	AI1	D	319	342	Right-handed alpha
Helix 74	AI2	D	367	373	Right-handed alpha
Helix 75	AI3	D	375	389	Right-handed alpha
Helix 76	AI4	D	408	426	Right-handed alpha
Helix 77	AI5	E	2	12	Right-handed alpha
Helix 78	AI6	E	15	19	Right-handed 310
Helix 79	AI7	E	21	26	Right-handed 310
Helix 80	AI8	E	56	60	Right-handed 310
Helix 81	AI9	E	68	80	Right-handed alpha
Helix 82	AJ1	E	89	103	Right-handed alpha
Helix 83	AJ2	E	114	131	Right-handed alpha
Helix 84	AJ3	E	146	149	Right-handed 310
Helix 85	AJ4	E	169	174	Right-handed 310
Helix 86	AJ5	E	183	195	Right-handed alpha
Helix 87	AJ6	E	218	231	Right-handed alpha
Helix 88	AJ7	E	248	255	Right-handed alpha
Helix 89	AJ8	E	266	269	Right-handed 310
Helix 90	AJ9	E	279	284	Right-handed alpha
Helix 91	AK1	E	302	316	Right-handed alpha
Helix 92	AK2	E	319	343	Right-handed alpha
Helix 93	AK3	E	367	373	Right-handed alpha
Helix 94	AK4	E	375	389	Right-handed alpha
Helix 95	AK5	E	408	426	Right-handed alpha
Helix 96	AK6	F	2	12	Right-handed alpha
Helix 97	AK7	F	15	19	Right-handed 310
Helix 98	AK8	F	21	26	Right-handed 310
Helix 99	AK9	F	56	60	Right-handed 310
Helix 100	AL1	F	68	80	Right-handed alpha
Helix 101	AL2	F	89	103	Right-handed alpha
Helix 102	AL3	F	114	131	Right-handed alpha
Helix 103	AL4	F	146	149	Right-handed 310
Helix 104	AL5	F	169	174	Right-handed alpha
Helix 105	AL6	F	183	195	Right-handed alpha
Helix 106	AL7	F	218	231	Right-handed alpha
Helix 107	AL8	F	248	255	Right-handed alpha
Helix 108	AL9	F	265	269	Right-handed 310
Helix 109	AM1	F	279	284	Right-handed alpha
Helix 110	AM2	F	301	315	Right-handed alpha
Helix 111	AM3	F	319	342	Right-handed alpha
Helix 112	AM4	F	367	373	Right-handed alpha
Helix 113	AM5	F	375	389	Right-handed alpha
Helix 114	AM6	F	408	425	Right-handed alpha

There are 24 sheets in PDB entry 5I92. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	36	40	first strand
Strand 2	A	43	46	anti-parallel
Strand 3	A	51	54	anti-parallel
Strand 4	A	391	392	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	108	112	first strand
Strand 2	A	274	278	anti-parallel
Strand 3	A	260	264	anti-parallel
Strand 4	A	233	237	parallel
Strand 5	A	198	203	parallel
Strand 6	A	134	139	parallel
Strand 7	A	176	180	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	151	153	first strand
Strand 2	A	161	163	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	347	351	first strand
Strand 2	A	354	358	anti-parallel
Strand 3	A	401	402	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	36	40	first strand
Strand 2	B	43	46	anti-parallel
Strand 3	B	51	54	anti-parallel
Strand 4	B	391	392	parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	108	112	first strand
Strand 2	B	274	278	anti-parallel
Strand 3	B	260	263	anti-parallel
Strand 4	B	233	238	parallel
Strand 5	B	198	203	parallel
Strand 6	B	134	139	parallel
Strand 7	B	176	180	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	151	153	first strand
Strand 2	B	161	163	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	347	351	first strand
Strand 2	B	354	358	anti-parallel
Strand 3	B	401	402	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	36	40	first strand
Strand 2	C	43	46	anti-parallel
Strand 3	C	51	54	anti-parallel
Strand 4	C	391	392	parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	108	112	first strand
Strand 2	C	274	278	anti-parallel
Strand 3	C	260	264	anti-parallel
Strand 4	C	233	237	parallel
Strand 5	C	198	203	parallel
Strand 6	C	134	139	parallel
Strand 7	C	176	180	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	151	153	first strand
Strand 2	C	161	163	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	347	351	first strand
Strand 2	C	354	358	anti-parallel
Strand 3	C	401	402	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	36	40	first strand
Strand 2	D	43	46	anti-parallel
Strand 3	D	51	54	anti-parallel
Strand 4	D	391	392	parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	108	112	first strand
Strand 2	D	274	278	anti-parallel
Strand 3	D	260	263	anti-parallel
Strand 4	D	233	238	parallel
Strand 5	D	198	203	parallel
Strand 6	D	134	139	parallel
Strand 7	D	176	180	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	151	153	first strand
Strand 2	D	161	163	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	347	351	first strand
Strand 2	D	354	358	anti-parallel
Strand 3	D	401	402	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	36	40	first strand
Strand 2	E	43	46	anti-parallel
Strand 3	E	51	54	anti-parallel
Strand 4	E	391	392	parallel

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There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	108	112	first strand
Strand 2	E	274	278	anti-parallel
Strand 3	E	260	264	anti-parallel
Strand 4	E	233	238	parallel
Strand 5	E	198	203	parallel
Strand 6	E	134	139	parallel
Strand 7	E	176	180	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	151	153	first strand
Strand 2	E	161	163	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	347	351	first strand
Strand 2	E	354	358	anti-parallel
Strand 3	E	401	402	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	36	40	first strand
Strand 2	F	43	46	anti-parallel
Strand 3	F	51	54	anti-parallel
Strand 4	F	391	392	parallel

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There are 7 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	108	112	first strand
Strand 2	F	274	278	anti-parallel
Strand 3	F	260	263	anti-parallel
Strand 4	F	233	238	parallel
Strand 5	F	198	203	parallel
Strand 6	F	134	139	parallel
Strand 7	F	176	180	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	151	153	first strand
Strand 2	F	161	163	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	347	351	first strand
Strand 2	F	354	358	anti-parallel
Strand 3	F	401	402	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5I92

Analysis of interatomic Contacts of Structural Units in PDB entry:
5I92