Analysis of interatomic Contacts of Structural Units in PDB entry:
5I95


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5I95 entry

There is 1 chain in PDB entry 5I95 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 41LEU 453
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 5I95. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
56 70Right-handed alpha
Helix 2
AA2
A
85 92Right-handed alpha
Helix 3
AA3
A
94 108Right-handed alpha
Helix 4
AA4
A
119 127Right-handed alpha
Helix 5
AA5
A
134 144Right-handed alpha
Helix 6
AA6
A
176 181Right-handed 310
Helix 7
AA7
A
224 243Right-handed alpha
Helix 8
AA8
A
257 274Right-handed alpha
Helix 9
AA9
A
274 281Right-handed alpha
Helix 10
AB1
A
290 300Right-handed alpha
Helix 11
AB2
A
309 325Right-handed alpha
Helix 12
AB3
A
351 360Right-handed alpha
Helix 13
AB4
A
368 387Right-handed alpha
Helix 14
AB5
A
388 408Right-handed alpha
Helix 15
AB6
A
412 421Right-handed alpha
Helix 16
AB7
A
422 425Right-handed 310
Helix 17
AB8
A
433 450Right-handed alpha
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There are 4 sheets in PDB entry 5I95. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 45first strand
Strand 2
A
75 76parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 83first strand
Strand 2
A
50 54parallel
Strand 3
A
109 112parallel
Strand 4
A
342 345parallel
Strand 5
A
330 335anti-parallel
Strand 6
A
146 151anti-parallel
Strand 7
A
169 173anti-parallel
Strand 8
A
305 308parallel
Strand 9
A
246 250parallel
Strand 10
A
285 289parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 186first strand
Strand 2
A
216 220anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
190 196first strand
Strand 2
A
205 212anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il