Analysis of interatomic Contacts of Structural Units in PDB entry:
5I9D


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5I9D entry

There are 2 chains in PDB entry 5I9D (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 42TYR 411
B
 U -4 C 6
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 5I9D. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
50 63Right-handed alpha
Helix 2
AA2
A
66 79Right-handed alpha
Helix 3
AA3
A
85 99Right-handed alpha
Helix 4
AA4
A
101 116Right-handed alpha
Helix 5
AA5
A
120 134Right-handed alpha
Helix 6
AA6
A
136 150Right-handed alpha
Helix 7
AA7
A
155 169Right-handed alpha
Helix 8
AA8
A
171 185Right-handed alpha
Helix 9
AA9
A
190 204Right-handed alpha
Helix 10
AB1
A
206 220Right-handed alpha
Helix 11
AB2
A
225 239Right-handed alpha
Helix 12
AB3
A
241 250Right-handed alpha
Helix 13
AB4
A
260 274Right-handed alpha
Helix 14
AB5
A
276 284Right-handed alpha
Helix 15
AB6
A
295 310Right-handed alpha
Helix 16
AB7
A
311 325Right-handed alpha
Helix 17
AB8
A
330 344Right-handed alpha
Helix 18
AB9
A
346 360Right-handed alpha
Helix 19
AC1
A
365 379Right-handed alpha
Helix 20
AC2
A
383 396Right-handed alpha
Helix 21
AC3
A
400 409Right-handed alpha
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There are no sheets in PDB entry 5I9D
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