Analysis of interatomic Contacts of Structural Units in PDB entry:
5I9H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5I9H entry

There are 2 chains in PDB entry 5I9H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 42GLU 419
B
 U 0 C 10
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 5I9H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
50 64Right-handed alpha
Helix 2
AA2
A
66 80Right-handed alpha
Helix 3
AA3
A
85 99Right-handed alpha
Helix 4
AA4
A
101 115Right-handed alpha
Helix 5
AA5
A
120 133Right-handed alpha
Helix 6
AA6
A
136 137Right-handed 310
Helix 7
AA7
A
139 139Right-handed 310
Helix 8
AA8
A
140 150Right-handed alpha
Helix 9
AA9
A
155 169Right-handed alpha
Helix 10
AB1
A
171 185Right-handed alpha
Helix 11
AB2
A
190 205Right-handed alpha
Helix 12
AB3
A
206 220Right-handed alpha
Helix 13
AB4
A
225 239Right-handed alpha
Helix 14
AB5
A
241 255Right-handed alpha
Helix 15
AB6
A
260 274Right-handed alpha
Helix 16
AB7
A
276 289Right-handed alpha
Helix 17
AB8
A
295 310Right-handed alpha
Helix 18
AB9
A
311 325Right-handed alpha
Helix 19
AC1
A
330 344Right-handed alpha
Helix 20
AC2
A
346 359Right-handed alpha
Helix 21
AC3
A
365 376Right-handed alpha
Helix 22
AC4
A
381 396Right-handed alpha
Helix 23
AC5
A
402 413Right-handed alpha
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There are no sheets in PDB entry 5I9H
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il