Analysis of interatomic Contacts of Structural Units in PDB entry:
5IAO

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5IAO entry

There are 6 chains in PDB entry 5IAO (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 12	ARG 193
B	GLU 12	ARG 193
C	GLU 12	ARG 193
D	GLU 12	ARG 193
E	GLU 12	ARG 193
F	GLU 12	ARG 193

There are 30 helices in PDB entry 5IAO. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	18	38	Right-handed alpha
Helix 2	AA2	A	57	75	Right-handed alpha
Helix 3	AA3	A	85	89	Right-handed 310
Helix 4	AA4	A	125	136	Right-handed alpha
Helix 5	AA5	A	180	185	Right-handed alpha
Helix 6	AA6	B	18	38	Right-handed alpha
Helix 7	AA7	B	57	75	Right-handed alpha
Helix 8	AA8	B	85	89	Right-handed 310
Helix 9	AA9	B	125	137	Right-handed alpha
Helix 10	AB1	B	180	185	Right-handed alpha
Helix 11	AB2	C	18	38	Right-handed alpha
Helix 12	AB3	C	57	75	Right-handed alpha
Helix 13	AB4	C	85	89	Right-handed 310
Helix 14	AB5	C	125	136	Right-handed alpha
Helix 15	AB6	C	180	185	Right-handed alpha
Helix 16	AB7	D	18	38	Right-handed alpha
Helix 17	AB8	D	57	75	Right-handed alpha
Helix 18	AB9	D	85	89	Right-handed 310
Helix 19	AC1	D	125	137	Right-handed alpha
Helix 20	AC2	D	180	185	Right-handed alpha
Helix 21	AC3	E	18	38	Right-handed alpha
Helix 22	AC4	E	57	75	Right-handed alpha
Helix 23	AC5	E	85	89	Right-handed 310
Helix 24	AC6	E	125	137	Right-handed alpha
Helix 25	AC7	E	180	185	Right-handed alpha
Helix 26	AC8	F	18	38	Right-handed alpha
Helix 27	AC9	F	57	75	Right-handed alpha
Helix 28	AD1	F	85	89	Right-handed 310
Helix 29	AD2	F	125	136	Right-handed alpha
Helix 30	AD3	F	180	185	Right-handed alpha

There are 12 sheets in PDB entry 5IAO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	13	17	first strand
Strand 2	A	188	192	anti-parallel
Strand 3	A	175	179	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	79	82	first strand
Strand 2	A	50	54	parallel
Strand 3	A	114	122	parallel
Strand 4	A	143	151	parallel
Strand 5	A	163	167	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	13	17	first strand
Strand 2	B	188	192	anti-parallel
Strand 3	B	175	179	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	79	82	first strand
Strand 2	B	50	54	parallel
Strand 3	B	114	122	parallel
Strand 4	B	143	151	parallel
Strand 5	B	163	167	parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	13	17	first strand
Strand 2	C	188	192	anti-parallel
Strand 3	C	175	179	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	79	82	first strand
Strand 2	C	50	54	parallel
Strand 3	C	114	122	parallel
Strand 4	C	143	151	parallel
Strand 5	C	163	167	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	13	17	first strand
Strand 2	D	188	192	anti-parallel
Strand 3	D	175	179	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	79	82	first strand
Strand 2	D	50	54	parallel
Strand 3	D	114	122	parallel
Strand 4	D	143	151	parallel
Strand 5	D	163	167	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	13	17	first strand
Strand 2	E	188	192	anti-parallel
Strand 3	E	175	179	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	79	82	first strand
Strand 2	E	50	54	parallel
Strand 3	E	114	122	parallel
Strand 4	E	143	151	parallel
Strand 5	E	163	167	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	13	17	first strand
Strand 2	F	188	192	anti-parallel
Strand 3	F	175	179	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	79	82	first strand
Strand 2	F	50	54	parallel
Strand 3	F	114	122	parallel
Strand 4	F	143	151	parallel
Strand 5	F	163	167	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5IAO

Analysis of interatomic Contacts of Structural Units in PDB entry:
5IAO