Analysis of interatomic Contacts of Structural Units in PDB entry:
5IC8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5IC8 entry

There are 4 chains in PDB entry 5IC8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 86LEU 409
B
 HIS 86LEU 409
C
 HIS 86LEU 409
D
 HIS 86LEU 409
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 59 helices in PDB entry 5IC8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
86 103Right-handed alpha
Helix 2
AA2
A
106 120Right-handed alpha
Helix 3
AA3
A
122 137Right-handed alpha
Helix 4
AA4
A
140 154Right-handed alpha
Helix 5
AA5
A
156 171Right-handed alpha
Helix 6
AA6
A
175 196Right-handed alpha
Helix 7
AA7
A
261 271Right-handed alpha
Helix 8
AA8
A
272 275Right-handed 310
Helix 9
AA9
A
276 287Right-handed alpha
Helix 10
AB1
A
293 305Right-handed alpha
Helix 11
AB2
A
312 328Right-handed alpha
Helix 12
AB3
A
331 341Right-handed alpha
Helix 13
AB4
A
342 344Right-handed 310
Helix 14
AB5
A
351 370Right-handed alpha
Helix 15
AB6
A
373 390Right-handed alpha
Helix 16
AB7
A
395 409Right-handed alpha
Helix 17
AB8
B
87 103Right-handed alpha
Helix 18
AB9
B
106 120Right-handed alpha
Helix 19
AC1
B
122 137Right-handed alpha
Helix 20
AC2
B
140 154Right-handed alpha
Helix 21
AC3
B
156 171Right-handed alpha
Helix 22
AC4
B
175 196Right-handed alpha
Helix 23
AC5
B
261 271Right-handed alpha
Helix 24
AC6
B
276 287Right-handed alpha
Helix 25
AC7
B
293 306Right-handed alpha
Helix 26
AC8
B
312 328Right-handed alpha
Helix 27
AC9
B
331 341Right-handed alpha
Helix 28
AD1
B
342 344Right-handed 310
Helix 29
AD2
B
351 370Right-handed alpha
Helix 30
AD3
B
373 390Right-handed alpha
Helix 31
AD4
B
395 409Right-handed alpha
Helix 32
AD5
C
87 103Right-handed alpha
Helix 33
AD6
C
106 120Right-handed alpha
Helix 34
AD7
C
122 137Right-handed alpha
Helix 35
AD8
C
140 154Right-handed alpha
Helix 36
AD9
C
156 171Right-handed alpha
Helix 37
AE1
C
175 194Right-handed alpha
Helix 38
AE2
C
261 270Right-handed alpha
Helix 39
AE3
C
276 287Right-handed alpha
Helix 40
AE4
C
293 306Right-handed alpha
Helix 41
AE5
C
313 328Right-handed alpha
Helix 42
AE6
C
333 345Right-handed alpha
Helix 43
AE7
C
353 369Right-handed alpha
Helix 44
AE8
C
378 391Right-handed alpha
Helix 45
AE9
C
397 409Right-handed alpha
Helix 46
AF1
D
87 103Right-handed alpha
Helix 47
AF2
D
106 120Right-handed alpha
Helix 48
AF3
D
122 137Right-handed alpha
Helix 49
AF4
D
140 154Right-handed alpha
Helix 50
AF5
D
156 171Right-handed alpha
Helix 51
AF6
D
175 194Right-handed alpha
Helix 52
AF7
D
261 270Right-handed alpha
Helix 53
AF8
D
276 287Right-handed alpha
Helix 54
AF9
D
293 306Right-handed alpha
Helix 55
AG1
D
312 328Right-handed alpha
Helix 56
AG2
D
331 341Right-handed alpha
Helix 57
AG3
D
354 368Right-handed alpha
Helix 58
AG4
D
373 391Right-handed alpha
Helix 59
AG5
D
396 409Right-handed alpha
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There are no sheets in PDB entry 5IC8
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il