Analysis of interatomic Contacts of Structural Units in PDB entry:
5IC9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5IC9 entry

There are 4 chains in PDB entry 5IC9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 771ARG 932
B
 GLU 742LEU 888
C
 VAL 773LEU 931
D
 PRO 767LEU 888
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 5IC9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
772 798Right-handed alpha
Helix 2
AA2
A
826 836Right-handed alpha
Helix 3
AA3
A
841 848Right-handed alpha
Helix 4
AA4
A
852 867Right-handed alpha
Helix 5
AA5
A
870 885Right-handed alpha
Helix 6
AA6
A
894 930Right-handed alpha
Helix 7
AA7
B
743 751Right-handed alpha
Helix 8
AA8
B
753 764Right-handed alpha
Helix 9
AA9
B
767 779Right-handed alpha
Helix 10
AB1
B
791 801Right-handed alpha
Helix 11
AB2
B
802 819Right-handed alpha
Helix 12
AB3
B
822 837Right-handed alpha
Helix 13
AB4
B
857 888Right-handed alpha
Helix 14
AB5
C
774 804Right-handed alpha
Helix 15
AB6
C
826 836Right-handed alpha
Helix 16
AB7
C
853 867Right-handed alpha
Helix 17
AB8
C
870 884Right-handed alpha
Helix 18
AB9
C
895 930Right-handed alpha
Helix 19
AC1
D
768 779Right-handed alpha
Helix 20
AC2
D
791 800Right-handed alpha
Helix 21
AC3
D
804 818Right-handed alpha
Helix 22
AC4
D
819 821Right-handed 310
Helix 23
AC5
D
822 835Right-handed alpha
Helix 24
AC6
D
859 888Right-handed alpha
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There are no sheets in PDB entry 5IC9
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il