Analysis of interatomic Contacts of Structural Units in PDB entry:
5ICQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ICQ entry

There is 1 chain in PDB entry 5ICQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 35ASN 609
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 5ICQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
144 159Right-handed alpha
Helix 2
AA2
A
160 169Right-handed alpha
Helix 3
AA3
A
192 199Right-handed alpha
Helix 4
AA4
A
204 208Right-handed 310
Helix 5
AA5
A
209 213Right-handed 310
Helix 6
AA6
A
251 255Right-handed 310
Helix 7
AA7
A
270 280Right-handed alpha
Helix 8
AA8
A
290 297Right-handed alpha
Helix 9
AA9
A
300 305Right-handed alpha
Helix 10
AB1
A
330 334Right-handed 310
Helix 11
AB2
A
335 344Right-handed alpha
Helix 12
AB3
A
347 356Right-handed alpha
Helix 13
AB4
A
380 388Right-handed alpha
Helix 14
AB5
A
395 400Right-handed alpha
Helix 15
AB6
A
415 428Right-handed alpha
Helix 16
AB7
A
452 468Right-handed alpha
Helix 17
AB8
A
479 490Right-handed alpha
Helix 18
AB9
A
507 514Right-handed alpha
Helix 19
AC1
A
515 518Right-handed 310
Helix 20
AC2
A
531 544Right-handed alpha
Helix 21
AC3
A
546 564Right-handed alpha
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There are 8 sheets in PDB entry 5ICQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 39first strand
Strand 2
A
109 112anti-parallel
Strand 3
A
100 103anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 71first strand
Strand 2
A
262 268parallel
Strand 3
A
237 242anti-parallel
Strand 4
A
227 233anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 120first strand
Strand 2
A
126 131anti-parallel
Strand 3
A
180 184anti-parallel
Strand 4
A
172 177anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
285 288first strand
Strand 2
A
576 581anti-parallel
Strand 3
A
308 313anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
472 477first strand
Strand 2
A
445 450parallel
Strand 3
A
494 498parallel
Strand 4
A
322 326anti-parallel
Strand 5
A
567 569anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
361 362first strand
Strand 2
A
571 572anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
431 432first strand
Strand 2
A
437 439anti-parallel
Strand 3
A
442 443anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
584 585first strand
Strand 2
A
606 607anti-parallel
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