Analysis of interatomic Contacts of Structural Units in PDB entry:
5IDI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5IDI entry

There are 2 chains in PDB entry 5IDI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1THR 443
B
 MET 1ASP 444
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 5IDI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 20Right-handed alpha
Helix 2
AA2
A
24 28Right-handed 310
Helix 3
AA3
A
31 38Right-handed alpha
Helix 4
AA4
A
43 47Right-handed 310
Helix 5
AA5
A
54 70Right-handed alpha
Helix 6
AA6
A
79 84Right-handed alpha
Helix 7
AA7
A
92 109Right-handed alpha
Helix 8
AA8
A
123 129Right-handed alpha
Helix 9
AA9
A
130 135Right-handed 310
Helix 10
AB1
A
136 153Right-handed alpha
Helix 11
AB2
A
164 174Right-handed alpha
Helix 12
AB3
A
184 210Right-handed alpha
Helix 13
AB4
A
230 245Right-handed alpha
Helix 14
AB5
A
246 256Right-handed alpha
Helix 15
AB6
A
259 267Right-handed alpha
Helix 16
AB7
A
268 270Right-handed 310
Helix 17
AB8
A
273 276Right-handed 310
Helix 18
AB9
A
277 282Right-handed alpha
Helix 19
AC1
A
304 306Right-handed 310
Helix 20
AC2
A
326 341Right-handed alpha
Helix 21
AC3
A
366 386Right-handed alpha
Helix 22
AC4
A
403 410Right-handed 310
Helix 23
AC5
A
427 440Right-handed alpha
Helix 24
AC6
B
15 20Right-handed alpha
Helix 25
AC7
B
24 28Right-handed 310
Helix 26
AC8
B
31 38Right-handed alpha
Helix 27
AC9
B
43 47Right-handed 310
Helix 28
AD1
B
54 70Right-handed alpha
Helix 29
AD2
B
79 84Right-handed alpha
Helix 30
AD3
B
92 109Right-handed alpha
Helix 31
AD4
B
123 128Right-handed alpha
Helix 32
AD5
B
129 135Right-handed 310
Helix 33
AD6
B
136 153Right-handed alpha
Helix 34
AD7
B
164 174Right-handed alpha
Helix 35
AD8
B
184 210Right-handed alpha
Helix 36
AD9
B
230 245Right-handed alpha
Helix 37
AE1
B
246 256Right-handed alpha
Helix 38
AE2
B
259 267Right-handed alpha
Helix 39
AE3
B
268 270Right-handed 310
Helix 40
AE4
B
273 276Right-handed 310
Helix 41
AE5
B
277 282Right-handed alpha
Helix 42
AE6
B
304 306Right-handed 310
Helix 43
AE7
B
326 341Right-handed alpha
Helix 44
AE8
B
366 386Right-handed alpha
Helix 45
AE9
B
403 410Right-handed 310
Helix 46
AF1
B
427 440Right-handed alpha
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There are 8 sheets in PDB entry 5IDI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 3first strand
Strand 2
A
441 442anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 13first strand
Strand 2
A
73 77parallel
Strand 3
A
112 118parallel
Strand 4
A
158 163parallel
Strand 5
A
214 219parallel
Strand 6
A
287 291parallel
Strand 7
A
345 350parallel
Strand 8
A
390 396parallel
Strand 9
A
9 13parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
223 226first strand
Strand 2
A
295 300parallel
Strand 3
A
308 311anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
415 417first strand
Strand 2
A
424 426anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 3first strand
Strand 2
B
441 442anti-parallel
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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
9 13first strand
Strand 2
B
73 77parallel
Strand 3
B
112 118parallel
Strand 4
B
158 163parallel
Strand 5
B
214 219parallel
Strand 6
B
287 291parallel
Strand 7
B
345 350parallel
Strand 8
B
390 396parallel
Strand 9
B
9 13parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
223 226first strand
Strand 2
B
295 300parallel
Strand 3
B
308 311anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
415 417first strand
Strand 2
B
424 426anti-parallel
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