Analysis of interatomic Contacts of Structural Units in PDB entry:
5IDY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5IDY entry

There are 2 chains in PDB entry 5IDY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -2PHE 259
B
 HIS -4PHE 259
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 5IDY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 30Right-handed alpha
Helix 2
AA2
A
40 56Right-handed alpha
Helix 3
AA3
A
68 79Right-handed alpha
Helix 4
AA4
A
96 100Right-handed 310
Helix 5
AA5
A
101 113Right-handed alpha
Helix 6
AA6
A
113 131Right-handed alpha
Helix 7
AA7
A
140 144Right-handed 310
Helix 8
AA8
A
147 149Right-handed 310
Helix 9
AA9
A
150 172Right-handed alpha
Helix 10
AB1
A
188 203Right-handed alpha
Helix 11
AB2
A
205 216Right-handed alpha
Helix 12
AB3
A
224 236Right-handed alpha
Helix 13
AB4
B
17 30Right-handed alpha
Helix 14
AB5
B
40 55Right-handed alpha
Helix 15
AB6
B
68 79Right-handed alpha
Helix 16
AB7
B
96 100Right-handed 310
Helix 17
AB8
B
101 113Right-handed alpha
Helix 18
AB9
B
113 131Right-handed alpha
Helix 19
AC1
B
140 144Right-handed 310
Helix 20
AC2
B
147 149Right-handed 310
Helix 21
AC3
B
150 172Right-handed alpha
Helix 22
AC4
B
188 203Right-handed alpha
Helix 23
AC5
B
205 216Right-handed alpha
Helix 24
AC6
B
224 236Right-handed alpha
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There are 2 sheets in PDB entry 5IDY. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 63first strand
Strand 2
A
33 38parallel
Strand 3
A
9 12parallel
Strand 4
A
84 87parallel
Strand 5
A
133 138parallel
Strand 6
A
176 183parallel
Strand 7
A
247 250parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
59 63first strand
Strand 2
B
33 38parallel
Strand 3
B
9 12parallel
Strand 4
B
84 87parallel
Strand 5
B
133 138parallel
Strand 6
B
176 183parallel
Strand 7
B
247 250parallel
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