Analysis of interatomic Contacts of Structural Units in PDB entry:
5IEI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5IEI entry

There is 1 chain in PDB entry 5IEI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 1511GLU 1647
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 5IEI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1530 1533Right-handed 310
Helix 2
AA2
A
1643 1646Right-handed 310
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There are 2 sheets in PDB entry 5IEI. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1512 1513first strand
Strand 2
A
1581 1584anti-parallel
Strand 3
A
1587 1592anti-parallel
Strand 4
A
1607 1614anti-parallel
Strand 5
A
1635 1642parallel
Strand 6
A
1625 1630anti-parallel
Strand 7
A
1538 1542parallel
Strand 8
A
1548 1550anti-parallel
Strand 9
A
1563 1567anti-parallel
Strand 10
A
1573 1576anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1517 1520first strand
Strand 2
A
1525 1528anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il