Analysis of interatomic Contacts of Structural Units in PDB entry:
5IF4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5IF4 entry

There are 2 chains in PDB entry 5IF4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 172GLU 322
B
 ASP 171LEU 324
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 5IF4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
172 192Right-handed alpha
Helix 2
AA2
A
202 224Right-handed alpha
Helix 3
AA3
A
224 236Right-handed alpha
Helix 4
AA4
A
239 245Right-handed alpha
Helix 5
AA5
A
246 256Right-handed alpha
Helix 6
AA6
A
260 281Right-handed alpha
Helix 7
AA7
A
283 285Right-handed 310
Helix 8
AA8
A
286 309Right-handed alpha
Helix 9
AA9
A
310 320Right-handed alpha
Helix 10
AB1
B
172 192Right-handed alpha
Helix 11
AB2
B
202 224Right-handed alpha
Helix 12
AB3
B
224 236Right-handed alpha
Helix 13
AB4
B
239 245Right-handed alpha
Helix 14
AB5
B
246 256Right-handed alpha
Helix 15
AB6
B
260 281Right-handed alpha
Helix 16
AB7
B
283 285Right-handed 310
Helix 17
AB8
B
286 309Right-handed alpha
Helix 18
AB9
B
310 320Right-handed alpha
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There are no sheets in PDB entry 5IF4
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il