Analysis of interatomic Contacts of Structural Units in PDB entry:
5IG8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5IG8 entry

There are 2 chains in PDB entry 5IG8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 5GLY 326
B
 LYS 6GLY 326
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 5IG8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 30Right-handed alpha
Helix 2
AA2
A
40 42Right-handed 310
Helix 3
AA3
A
91 113Right-handed alpha
Helix 4
AA4
A
121 129Right-handed alpha
Helix 5
AA5
A
130 141Right-handed alpha
Helix 6
AA6
A
153 163Right-handed alpha
Helix 7
AA7
A
200 204Right-handed 310
Helix 8
AA8
A
262 276Right-handed alpha
Helix 9
AA9
A
304 312Right-handed alpha
Helix 10
AB1
A
314 326Right-handed alpha
Helix 11
AB2
B
18 30Right-handed alpha
Helix 12
AB3
B
40 42Right-handed 310
Helix 13
AB4
B
99 113Right-handed alpha
Helix 14
AB5
B
121 129Right-handed alpha
Helix 15
AB6
B
130 141Right-handed alpha
Helix 16
AB7
B
153 162Right-handed alpha
Helix 17
AB8
B
262 277Right-handed alpha
Helix 18
AB9
B
304 312Right-handed alpha
Helix 19
AC1
B
314 326Right-handed alpha
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There are 8 sheets in PDB entry 5IG8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 38first strand
Strand 2
A
7 12parallel
Strand 3
A
73 78parallel
Strand 4
A
117 119parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 50first strand
Strand 2
A
59 63anti-parallel
Strand 3
A
66 69anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 151first strand
Strand 2
A
208 212anti-parallel
Strand 3
A
169 177anti-parallel
Strand 4
A
186 193anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
228 235first strand
Strand 2
A
218 225anti-parallel
Strand 3
A
280 287anti-parallel
Strand 4
A
293 298anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
34 38first strand
Strand 2
B
7 12parallel
Strand 3
B
73 78parallel
Strand 4
B
117 119parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 51first strand
Strand 2
B
58 63anti-parallel
Strand 3
B
66 69anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
148 150first strand
Strand 2
B
209 211anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
228 235first strand
Strand 2
B
218 225anti-parallel
Strand 3
B
280 287anti-parallel
Strand 4
B
293 299anti-parallel
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