Analysis of interatomic Contacts of Structural Units in PDB entry:
5IG9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5IG9 entry

There are 16 chains in PDB entry 5IG9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 2	ALA 325
B	THR 2	ALA 325
C	MET 1	SER 324
D	MET 1	SER 324
E	MET 1	SER 324
F	MET 1	SER 324
G	MET 1	SER 324
H	MET 1	ALA 325
P	ALA 11	SER 22
I	ALA 11	SER 22
J	ALA 11	SER 22
K	ALA 11	SER 22
L	ALA 11	SER 22
M	ALA 11	VAL 21
N	LYS 10	SER 22
O	ALA 11	SER 22

There are 95 helices in PDB entry 5IG9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	13	24	Right-handed alpha
Helix 2	AA2	A	35	37	Right-handed 310
Helix 3	AA3	A	65	67	Right-handed 310
Helix 4	AA4	A	86	108	Right-handed alpha
Helix 5	AA5	A	115	123	Right-handed alpha
Helix 6	AA6	A	124	135	Right-handed alpha
Helix 7	AA7	A	147	158	Right-handed alpha
Helix 8	AA8	A	191	201	Right-handed 310
Helix 9	AA9	A	259	274	Right-handed alpha
Helix 10	AB1	A	301	306	Right-handed alpha
Helix 11	AB2	A	312	324	Right-handed alpha
Helix 12	AB3	B	13	25	Right-handed alpha
Helix 13	AB4	B	35	37	Right-handed 310
Helix 14	AB5	B	65	67	Right-handed 310
Helix 15	AB6	B	86	108	Right-handed alpha
Helix 16	AB7	B	115	123	Right-handed alpha
Helix 17	AB8	B	124	135	Right-handed alpha
Helix 18	AB9	B	147	158	Right-handed alpha
Helix 19	AC1	B	189	194	Right-handed alpha
Helix 20	AC2	B	195	201	Right-handed 310
Helix 21	AC3	B	259	274	Right-handed alpha
Helix 22	AC4	B	302	307	Right-handed alpha
Helix 23	AC5	B	312	323	Right-handed alpha
Helix 24	AC6	C	13	25	Right-handed alpha
Helix 25	AC7	C	35	37	Right-handed 310
Helix 26	AC8	C	86	108	Right-handed alpha
Helix 27	AC9	C	115	123	Right-handed alpha
Helix 28	AD1	C	124	135	Right-handed alpha
Helix 29	AD2	C	147	158	Right-handed alpha
Helix 30	AD3	C	191	201	Right-handed 310
Helix 31	AD4	C	259	274	Right-handed alpha
Helix 32	AD5	C	301	305	Right-handed 310
Helix 33	AD6	C	312	323	Right-handed alpha
Helix 34	AD7	D	13	25	Right-handed alpha
Helix 35	AD8	D	35	37	Right-handed 310
Helix 36	AD9	D	86	108	Right-handed alpha
Helix 37	AE1	D	115	123	Right-handed alpha
Helix 38	AE2	D	124	135	Right-handed alpha
Helix 39	AE3	D	147	158	Right-handed alpha
Helix 40	AE4	D	191	201	Right-handed 310
Helix 41	AE5	D	259	274	Right-handed alpha
Helix 42	AE6	D	301	305	Right-handed 310
Helix 43	AE7	D	312	323	Right-handed alpha
Helix 44	AE8	E	13	24	Right-handed alpha
Helix 45	AE9	E	35	37	Right-handed 310
Helix 46	AF1	E	86	108	Right-handed alpha
Helix 47	AF2	E	115	123	Right-handed alpha
Helix 48	AF3	E	124	135	Right-handed alpha
Helix 49	AF4	E	147	158	Right-handed alpha
Helix 50	AF5	E	189	194	Right-handed alpha
Helix 51	AF6	E	195	201	Right-handed 310
Helix 52	AF7	E	259	274	Right-handed alpha
Helix 53	AF8	E	301	306	Right-handed alpha
Helix 54	AF9	E	312	323	Right-handed alpha
Helix 55	AG1	F	13	25	Right-handed alpha
Helix 56	AG2	F	35	37	Right-handed 310
Helix 57	AG3	F	86	108	Right-handed alpha
Helix 58	AG4	F	115	123	Right-handed alpha
Helix 59	AG5	F	124	135	Right-handed alpha
Helix 60	AG6	F	147	158	Right-handed alpha
Helix 61	AG7	F	191	195	Right-handed 310
Helix 62	AG8	F	196	201	Right-handed 310
Helix 63	AG9	F	259	274	Right-handed alpha
Helix 64	AH1	F	301	305	Right-handed 310
Helix 65	AH2	F	312	323	Right-handed alpha
Helix 66	AH3	G	13	25	Right-handed alpha
Helix 67	AH4	G	35	37	Right-handed 310
Helix 68	AH5	G	86	108	Right-handed alpha
Helix 69	AH6	G	115	123	Right-handed alpha
Helix 70	AH7	G	124	135	Right-handed alpha
Helix 71	AH8	G	147	158	Right-handed alpha
Helix 72	AH9	G	189	194	Right-handed alpha
Helix 73	AI1	G	195	201	Right-handed 310
Helix 74	AI2	G	259	274	Right-handed alpha
Helix 75	AI3	G	301	305	Right-handed 310
Helix 76	AI4	G	312	323	Right-handed alpha
Helix 77	AI5	H	13	25	Right-handed alpha
Helix 78	AI6	H	35	37	Right-handed 310
Helix 79	AI7	H	86	108	Right-handed alpha
Helix 80	AI8	H	115	123	Right-handed alpha
Helix 81	AI9	H	124	135	Right-handed alpha
Helix 82	AJ1	H	147	158	Right-handed alpha
Helix 83	AJ2	H	189	194	Right-handed alpha
Helix 84	AJ3	H	195	201	Right-handed 310
Helix 85	AJ4	H	259	274	Right-handed alpha
Helix 86	AJ5	H	301	305	Right-handed 310
Helix 87	AJ6	H	312	323	Right-handed alpha
Helix 88	AJ7	P	13	18	Right-handed 310
Helix 89	AJ8	I	13	19	Right-handed 310
Helix 90	AJ9	J	13	19	Right-handed 310
Helix 91	AK1	K	13	19	Right-handed 310
Helix 92	AK2	L	13	19	Right-handed 310
Helix 93	AK3	M	13	19	Right-handed 310
Helix 94	AK4	N	13	19	Right-handed 310
Helix 95	AK5	O	13	19	Right-handed 310

There are 27 sheets in PDB entry 5IG9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	29	33	first strand
Strand 2	A	3	7	parallel
Strand 3	A	69	72	parallel
Strand 4	A	111	113	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	60	63	first strand
Strand 2	A	54	57	anti-parallel
Strand 3	A	42	47	anti-parallel
Strand 4	B	142	145	anti-parallel
Strand 5	B	204	208	anti-parallel
Strand 6	B	163	166	anti-parallel
Strand 7	B	186	187	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	186	187	first strand
Strand 2	A	163	166	anti-parallel
Strand 3	A	204	208	anti-parallel
Strand 4	A	142	145	anti-parallel
Strand 5	B	42	47	anti-parallel
Strand 6	B	53	57	anti-parallel
Strand 7	B	60	63	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	173	174	first strand
Strand 2	A	180	181	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	254	255	first strand
Strand 2	A	224	231	anti-parallel
Strand 3	A	214	221	anti-parallel
Strand 4	A	277	284	anti-parallel
Strand 5	A	290	296	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	29	33	first strand
Strand 2	B	3	7	parallel
Strand 3	B	69	72	parallel
Strand 4	B	111	113	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	173	174	first strand
Strand 2	B	180	182	anti-parallel
Strand 3	J	20	21	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	254	255	first strand
Strand 2	B	224	231	anti-parallel
Strand 3	B	214	221	anti-parallel
Strand 4	B	277	284	anti-parallel
Strand 5	B	290	296	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	28	33	first strand
Strand 2	C	2	7	parallel
Strand 3	C	67	72	parallel
Strand 4	C	111	113	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	60	63	first strand
Strand 2	C	54	57	anti-parallel
Strand 3	C	42	47	anti-parallel
Strand 4	D	142	145	anti-parallel
Strand 5	D	204	208	anti-parallel
Strand 6	D	163	166	anti-parallel
Strand 7	D	186	187	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	186	187	first strand
Strand 2	C	163	166	anti-parallel
Strand 3	C	204	208	anti-parallel
Strand 4	C	142	145	anti-parallel
Strand 5	D	42	47	anti-parallel
Strand 6	D	52	57	anti-parallel
Strand 7	D	60	63	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	254	255	first strand
Strand 2	C	224	231	anti-parallel
Strand 3	C	214	221	anti-parallel
Strand 4	C	277	284	anti-parallel
Strand 5	C	290	296	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	28	33	first strand
Strand 2	D	2	7	parallel
Strand 3	D	67	72	parallel
Strand 4	D	111	113	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	181	182	first strand
Strand 2	L	20	21	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	254	255	first strand
Strand 2	D	224	231	anti-parallel
Strand 3	D	214	221	anti-parallel
Strand 4	D	277	284	anti-parallel
Strand 5	D	290	296	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	28	33	first strand
Strand 2	E	2	7	parallel
Strand 3	E	67	72	parallel
Strand 4	E	111	113	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	60	63	first strand
Strand 2	E	54	57	anti-parallel
Strand 3	E	42	47	anti-parallel
Strand 4	H	142	145	anti-parallel
Strand 5	H	204	208	anti-parallel
Strand 6	H	163	166	anti-parallel
Strand 7	H	186	187	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	186	187	first strand
Strand 2	E	163	166	anti-parallel
Strand 3	E	204	208	anti-parallel
Strand 4	E	142	145	anti-parallel
Strand 5	H	42	47	anti-parallel
Strand 6	H	52	57	anti-parallel
Strand 7	H	60	63	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	254	255	first strand
Strand 2	E	224	231	anti-parallel
Strand 3	E	214	221	anti-parallel
Strand 4	E	277	284	anti-parallel
Strand 5	E	290	296	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	28	33	first strand
Strand 2	F	2	7	parallel
Strand 3	F	67	72	parallel
Strand 4	F	111	113	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	60	63	first strand
Strand 2	F	53	57	anti-parallel
Strand 3	F	42	47	anti-parallel
Strand 4	G	142	145	anti-parallel
Strand 5	G	204	208	anti-parallel
Strand 6	G	163	166	anti-parallel
Strand 7	G	186	187	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	186	187	first strand
Strand 2	F	163	166	anti-parallel
Strand 3	F	204	208	anti-parallel
Strand 4	F	142	145	anti-parallel
Strand 5	G	42	47	anti-parallel
Strand 6	G	54	57	anti-parallel
Strand 7	G	60	63	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	254	255	first strand
Strand 2	F	224	231	anti-parallel
Strand 3	F	214	221	anti-parallel
Strand 4	F	277	284	anti-parallel
Strand 5	F	290	296	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	28	33	first strand
Strand 2	G	2	7	parallel
Strand 3	G	67	72	parallel
Strand 4	G	111	113	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	254	255	first strand
Strand 2	G	224	231	anti-parallel
Strand 3	G	214	221	anti-parallel
Strand 4	G	277	284	anti-parallel
Strand 5	G	290	296	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	28	33	first strand
Strand 2	H	2	7	parallel
Strand 3	H	67	72	parallel
Strand 4	H	111	113	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	254	255	first strand
Strand 2	H	224	231	anti-parallel
Strand 3	H	214	221	anti-parallel
Strand 4	H	277	284	anti-parallel
Strand 5	H	290	296	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5IG9

Analysis of interatomic Contacts of Structural Units in PDB entry:
5IG9