Analysis of interatomic Contacts of Structural Units in PDB entry:
5IHR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5IHR entry

There is 1 chain in PDB entry 5IHR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 41HIS 1008
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 23 helices in PDB entry 5IHR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
69 72Right-handed 310
Helix 2
AA2
A
74 87Right-handed alpha
Helix 3
AA3
A
98 103Right-handed alpha
Helix 4
AA4
A
112 116Right-handed 310
Helix 5
AA5
A
117 128Right-handed alpha
Helix 6
AA6
A
143 148Right-handed 310
Helix 7
AA7
A
149 155Right-handed 310
Helix 8
AA8
A
163 184Right-handed alpha
Helix 9
AA9
A
185 189Right-handed 310
Helix 10
AB1
A
212 226Right-handed alpha
Helix 11
AB2
A
280 289Right-handed alpha
Helix 12
AB3
A
311 319Right-handed alpha
Helix 13
AB4
A
320 333Right-handed alpha
Helix 14
AB5
A
376 391Right-handed alpha
Helix 15
AB6
A
393 398Right-handed alpha
Helix 16
AB7
A
567 571Right-handed alpha
Helix 17
AB8
A
589 595Right-handed alpha
Helix 18
AB9
A
671 675Right-handed 310
Helix 19
AC1
A
683 687Right-handed 310
Helix 20
AC2
A
717 722Right-handed 310
Helix 21
AC3
A
811 815Right-handed 310
Helix 22
AC4
A
828 832Right-handed 310
Helix 23
AC5
A
858 863Right-handed alpha
Back to top of page

There are 13 sheets in PDB entry 5IHR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 48first strand
Strand 2
A
53 55anti-parallel
Strand 3
A
58 60anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
192 197first strand
Strand 2
A
130 136parallel
Strand 3
A
92 96parallel
Strand 4
A
62 67parallel
Strand 5
A
338 345parallel
Strand 6
A
295 300parallel
Strand 7
A
256 259parallel
Back to list of sheets
Back to top of page

There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
399 400first strand
Strand 2
A
414 420anti-parallel
Strand 3
A
426 432anti-parallel
Strand 4
A
470 479anti-parallel
Strand 5
A
482 487anti-parallel
Strand 6
A
512 518anti-parallel
Strand 7
A
541 547anti-parallel
Strand 8
A
534 537anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
440 443first strand
Strand 2
A
463 466anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
445 447first strand
Strand 2
A
454 456anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
490 497first strand
Strand 2
A
500 507anti-parallel
Strand 3
A
560 566parallel
Strand 4
A
553 557anti-parallel
Strand 5
A
524 527anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
573 574first strand
Strand 2
A
598 600anti-parallel
Strand 3
A
625 630anti-parallel
Strand 4
A
656 660anti-parallel
Strand 5
A
649 650anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
578 579first strand
Strand 2
A
604 611parallel
Strand 3
A
614 620anti-parallel
Strand 4
A
638 641parallel
Strand 5
A
644 646anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
876 877first strand
Strand 2
A
678 681anti-parallel
Strand 3
A
888 899anti-parallel
Strand 4
A
955 966anti-parallel
Strand 5
A
921 927anti-parallel
Strand 6
A
930 936anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
762 767first strand
Strand 2
A
755 759anti-parallel
Strand 3
A
790 798anti-parallel
Strand 4
A
727 735anti-parallel
Strand 5
A
833 837anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
775 781first strand
Strand 2
A
742 748anti-parallel
Strand 3
A
818 824anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
904 905first strand
Strand 2
A
985 986anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
944 947first strand
Strand 2
A
908 912anti-parallel
Strand 3
A
977 981anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il