Analysis of interatomic Contacts of Structural Units in PDB entry:
5IJG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5IJG entry

There are 2 chains in PDB entry 5IJG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 15ALA 427
B
 SER 7ALA 426
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 5IJG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 22Right-handed alpha
Helix 2
AA2
A
85 97Right-handed alpha
Helix 3
AA3
A
106 119Right-handed alpha
Helix 4
AA4
A
132 141Right-handed alpha
Helix 5
AA5
A
141 146Right-handed alpha
Helix 6
AA6
A
158 171Right-handed alpha
Helix 7
AA7
A
192 208Right-handed alpha
Helix 8
AA8
A
226 230Right-handed 310
Helix 9
AA9
A
257 272Right-handed alpha
Helix 10
AB1
A
276 288Right-handed alpha
Helix 11
AB2
A
289 310Right-handed alpha
Helix 12
AB3
A
319 323Right-handed 310
Helix 13
AB4
A
327 337Right-handed alpha
Helix 14
AB5
A
350 362Right-handed alpha
Helix 15
AB6
A
390 397Right-handed alpha
Helix 16
AB7
A
412 427Right-handed alpha
Helix 17
AB8
B
17 25Right-handed alpha
Helix 18
AB9
B
27 29Right-handed 310
Helix 19
AC1
B
50 62Right-handed alpha
Helix 20
AC2
B
84 97Right-handed alpha
Helix 21
AC3
B
106 119Right-handed alpha
Helix 22
AC4
B
132 141Right-handed alpha
Helix 23
AC5
B
143 147Right-handed 310
Helix 24
AC6
B
158 173Right-handed alpha
Helix 25
AC7
B
192 208Right-handed alpha
Helix 26
AC8
B
226 231Right-handed 310
Helix 27
AC9
B
257 272Right-handed alpha
Helix 28
AD1
B
276 309Right-handed alpha
Helix 29
AD2
B
319 323Right-handed 310
Helix 30
AD3
B
327 337Right-handed alpha
Helix 31
AD4
B
350 362Right-handed alpha
Helix 32
AD5
B
392 398Right-handed alpha
Helix 33
AD6
B
412 424Right-handed alpha
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There are 6 sheets in PDB entry 5IJG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 104first strand
Strand 2
A
252 256anti-parallel
Strand 3
A
234 238anti-parallel
Strand 4
A
212 216parallel
Strand 5
A
174 181parallel
Strand 6
A
123 127parallel
Strand 7
A
149 152parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
314 318first strand
Strand 2
A
343 348anti-parallel
Strand 3
A
403 407anti-parallel
Strand 4
A
377 379anti-parallel
Strand 5
A
366 367parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 11first strand
Strand 2
B
14 15anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
31 34first strand
Strand 2
B
76 79anti-parallel
Strand 3
B
46 47anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
100 104first strand
Strand 2
B
252 256anti-parallel
Strand 3
B
234 238anti-parallel
Strand 4
B
212 216parallel
Strand 5
B
175 181parallel
Strand 6
B
124 128parallel
Strand 7
B
149 153parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
314 318first strand
Strand 2
B
343 348anti-parallel
Strand 3
B
403 407anti-parallel
Strand 4
B
377 379anti-parallel
Strand 5
B
366 367parallel
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