Analysis of interatomic Contacts of Structural Units in PDB entry:
5IJX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5IJX entry

There is 1 chain in PDB entry 5IJX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 50HIS 427
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 5IJX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
51 76Right-handed alpha
Helix 2
AA2
A
81 89Right-handed alpha
Helix 3
AA3
A
98 109Right-handed alpha
Helix 4
AA4
A
125 127Right-handed 310
Helix 5
AA5
A
128 141Right-handed alpha
Helix 6
AA6
A
152 156Right-handed 310
Helix 7
AA7
A
170 197Right-handed alpha
Helix 8
AA8
A
214 219Right-handed alpha
Helix 9
AA9
A
222 230Right-handed alpha
Helix 10
AB1
A
235 241Right-handed alpha
Helix 11
AB2
A
242 251Right-handed alpha
Helix 12
AB3
A
256 261Right-handed alpha
Helix 13
AB4
A
261 275Right-handed alpha
Helix 14
AB5
A
287 305Right-handed alpha
Helix 15
AB6
A
317 321Right-handed 310
Helix 16
AB7
A
355 365Right-handed alpha
Helix 17
AB8
A
370 379Right-handed alpha
Helix 18
AB9
A
382 396Right-handed alpha
Helix 19
AC1
A
400 416Right-handed alpha
Helix 20
AC2
A
416 427Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5IJX.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 96first strand
Strand 2
A
324 328anti-parallel
Strand 3
A
278 284parallel
Strand 4
A
112 117parallel
Strand 5
A
144 149parallel
Strand 6
A
209 213parallel
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