Analysis of interatomic Contacts of Structural Units in PDB entry:
5IL6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5IL6 entry

There are 2 chains in PDB entry 5IL6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 4370PRO 4644
B
 VAL 4369THR 4646
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 5IL6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4396 4401Right-handed alpha
Helix 2
AA2
A
4411 4427Right-handed alpha
Helix 3
AA3
A
4512 4524Right-handed alpha
Helix 4
AA4
A
4529 4532Right-handed 310
Helix 5
AA5
A
4552 4557Right-handed 310
Helix 6
AA6
A
4562 4572Right-handed alpha
Helix 7
AA7
A
4573 4577Right-handed 310
Helix 8
AA8
B
4396 4401Right-handed alpha
Helix 9
AA9
B
4411 4427Right-handed alpha
Helix 10
AB1
B
4512 4524Right-handed alpha
Helix 11
AB2
B
4529 4532Right-handed 310
Helix 12
AB3
B
4552 4557Right-handed 310
Helix 13
AB4
B
4562 4572Right-handed alpha
Helix 14
AB5
B
4573 4577Right-handed 310
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There are 4 sheets in PDB entry 5IL6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 13 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4378 4379first strand
Strand 2
A
4386 4391anti-parallel
Strand 3
A
4457 4466anti-parallel
Strand 4
A
4469 4477anti-parallel
Strand 5
A
4483 4494anti-parallel
Strand 6
A
4436 4444anti-parallel
Strand 7
A
4589 4598anti-parallel
Strand 8
A
4633 4643anti-parallel
Strand 9
A
4620 4627anti-parallel
Strand 10
A
4605 4613anti-parallel
Strand 11
A
4543 4549anti-parallel
Strand 12
A
4534 4540anti-parallel
Strand 13
A
4509 4511anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4407 4408first strand
Strand 2
A
4402 4404anti-parallel
Strand 3
A
4525 4527anti-parallel
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There are 13 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4378 4379first strand
Strand 2
B
4386 4391anti-parallel
Strand 3
B
4457 4466anti-parallel
Strand 4
B
4469 4477anti-parallel
Strand 5
B
4483 4494anti-parallel
Strand 6
B
4436 4444anti-parallel
Strand 7
B
4588 4598anti-parallel
Strand 8
B
4633 4644anti-parallel
Strand 9
B
4620 4627anti-parallel
Strand 10
B
4605 4613anti-parallel
Strand 11
B
4543 4549anti-parallel
Strand 12
B
4534 4540anti-parallel
Strand 13
B
4509 4511anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4407 4408first strand
Strand 2
B
4402 4404anti-parallel
Strand 3
B
4525 4527anti-parallel
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