Analysis of interatomic Contacts of Structural Units in PDB entry:
5IL7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5IL7 entry

There are 2 chains in PDB entry 5IL7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2ARG 441
B
 SER 2ARG 441
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 38 helices in PDB entry 5IL7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 15Right-handed alpha
Helix 2
AA2
A
50 61Right-handed alpha
Helix 3
AA3
A
78 84Right-handed 310
Helix 4
AA4
A
100 106Right-handed 310
Helix 5
AA5
A
122 126Right-handed 310
Helix 6
AA6
A
144 150Right-handed 310
Helix 7
AA7
A
166 170Right-handed 310
Helix 8
AA8
A
188 194Right-handed 310
Helix 9
AA9
A
210 216Right-handed 310
Helix 10
AB1
A
232 238Right-handed 310
Helix 11
AB2
A
254 258Right-handed 310
Helix 12
AB3
A
276 280Right-handed 310
Helix 13
AB4
A
298 302Right-handed 310
Helix 14
AB5
A
320 326Right-handed 310
Helix 15
AB6
A
342 348Right-handed 310
Helix 16
AB7
A
364 370Right-handed 310
Helix 17
AB8
A
387 393Right-handed 310
Helix 18
AB9
A
419 424Right-handed alpha
Helix 19
AC1
A
426 439Right-handed alpha
Helix 20
AC2
B
3 15Right-handed alpha
Helix 21
AC3
B
50 62Right-handed alpha
Helix 22
AC4
B
78 84Right-handed 310
Helix 23
AC5
B
100 106Right-handed 310
Helix 24
AC6
B
122 128Right-handed 310
Helix 25
AC7
B
144 150Right-handed 310
Helix 26
AC8
B
166 172Right-handed 310
Helix 27
AC9
B
188 194Right-handed 310
Helix 28
AD1
B
210 214Right-handed 310
Helix 29
AD2
B
232 236Right-handed 310
Helix 30
AD3
B
254 260Right-handed 310
Helix 31
AD4
B
276 280Right-handed 310
Helix 32
AD5
B
298 302Right-handed 310
Helix 33
AD6
B
320 324Right-handed 310
Helix 34
AD7
B
342 348Right-handed 310
Helix 35
AD8
B
364 368Right-handed 310
Helix 36
AD9
B
387 392Right-handed 310
Helix 37
AE1
B
419 424Right-handed alpha
Helix 38
AE2
B
426 441Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 5IL7. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 20 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 20first strand
Strand 2
A
30 33parallel
Strand 3
A
39 43anti-parallel
Strand 4
A
67 69parallel
Strand 5
A
89 91parallel
Strand 6
A
111 113parallel
Strand 7
A
133 135parallel
Strand 8
A
155 157parallel
Strand 9
A
177 179parallel
Strand 10
A
199 201parallel
Strand 11
A
221 223parallel
Strand 12
A
243 245parallel
Strand 13
A
265 267parallel
Strand 14
A
287 289parallel
Strand 15
A
309 311parallel
Strand 16
A
331 333parallel
Strand 17
A
353 355parallel
Strand 18
A
375 377parallel
Strand 19
A
407 410parallel
Strand 20
A
396 399parallel
Back to list of sheets
Back to top of page

There are 20 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
19 20first strand
Strand 2
B
29 33parallel
Strand 3
B
39 44anti-parallel
Strand 4
B
67 69parallel
Strand 5
B
89 91parallel
Strand 6
B
111 113parallel
Strand 7
B
133 135parallel
Strand 8
B
155 157parallel
Strand 9
B
177 179parallel
Strand 10
B
199 201parallel
Strand 11
B
221 223parallel
Strand 12
B
243 245parallel
Strand 13
B
265 267parallel
Strand 14
B
287 289parallel
Strand 15
B
309 311parallel
Strand 16
B
331 333parallel
Strand 17
B
353 355parallel
Strand 18
B
375 377parallel
Strand 19
B
407 410parallel
Strand 20
B
396 399parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il