Analysis of interatomic Contacts of Structural Units in PDB entry:
5INF

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5INF entry

There are 6 chains in PDB entry 5INF (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 15	LEU 532
B	THR 15	LEU 532
C	PRO 14	LEU 532
D	THR 15	LEU 532
E	SER 16	LEU 532
F	SER 16	LEU 532

There are143 helices in PDB entry 5INF. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	16	33	Right-handed alpha
Helix 2	AA2	A	33	45	Right-handed alpha
Helix 3	AA3	A	50	59	Right-handed alpha
Helix 4	AA4	A	109	113	Right-handed 310
Helix 5	AA5	A	115	133	Right-handed alpha
Helix 6	AA6	A	146	149	Right-handed 310
Helix 7	AA7	A	150	168	Right-handed alpha
Helix 8	AA8	A	186	192	Right-handed alpha
Helix 9	AA9	A	221	227	Right-handed alpha
Helix 10	AB1	A	227	234	Right-handed alpha
Helix 11	AB2	A	244	259	Right-handed alpha
Helix 12	AB3	A	279	285	Right-handed alpha
Helix 13	AB4	A	298	307	Right-handed alpha
Helix 14	AB5	A	308	311	Right-handed 310
Helix 15	AB6	A	344	348	Right-handed 310
Helix 16	AB7	A	350	367	Right-handed alpha
Helix 17	AB8	A	383	389	Right-handed alpha
Helix 18	AB9	A	390	405	Right-handed alpha
Helix 19	AC1	A	419	425	Right-handed alpha
Helix 20	AC2	A	427	431	Right-handed 310
Helix 21	AC3	A	486	492	Right-handed alpha
Helix 22	AC4	A	500	502	Right-handed 310
Helix 23	AC5	A	503	515	Right-handed alpha
Helix 24	AC6	B	16	33	Right-handed alpha
Helix 25	AC7	B	33	45	Right-handed alpha
Helix 26	AC8	B	50	59	Right-handed alpha
Helix 27	AC9	B	109	113	Right-handed 310
Helix 28	AD1	B	115	133	Right-handed alpha
Helix 29	AD2	B	146	149	Right-handed 310
Helix 30	AD3	B	150	168	Right-handed alpha
Helix 31	AD4	B	183	192	Right-handed alpha
Helix 32	AD5	B	208	217	Right-handed alpha
Helix 33	AD6	B	221	227	Right-handed alpha
Helix 34	AD7	B	227	234	Right-handed alpha
Helix 35	AD8	B	244	257	Right-handed alpha
Helix 36	AD9	B	279	284	Right-handed alpha
Helix 37	AE1	B	285	288	Right-handed 310
Helix 38	AE2	B	298	307	Right-handed alpha
Helix 39	AE3	B	308	311	Right-handed 310
Helix 40	AE4	B	344	348	Right-handed 310
Helix 41	AE5	B	350	367	Right-handed alpha
Helix 42	AE6	B	383	389	Right-handed alpha
Helix 43	AE7	B	390	405	Right-handed alpha
Helix 44	AE8	B	419	425	Right-handed alpha
Helix 45	AE9	B	486	493	Right-handed alpha
Helix 46	AF1	B	500	502	Right-handed 310
Helix 47	AF2	B	503	515	Right-handed alpha
Helix 48	AF3	C	16	33	Right-handed alpha
Helix 49	AF4	C	33	46	Right-handed alpha
Helix 50	AF5	C	50	59	Right-handed alpha
Helix 51	AF6	C	115	133	Right-handed alpha
Helix 52	AF7	C	150	168	Right-handed alpha
Helix 53	AF8	C	186	192	Right-handed alpha
Helix 54	AF9	C	208	215	Right-handed alpha
Helix 55	AG1	C	221	227	Right-handed alpha
Helix 56	AG2	C	227	234	Right-handed alpha
Helix 57	AG3	C	244	259	Right-handed alpha
Helix 58	AG4	C	279	288	Right-handed alpha
Helix 59	AG5	C	298	307	Right-handed alpha
Helix 60	AG6	C	308	311	Right-handed 310
Helix 61	AG7	C	344	348	Right-handed 310
Helix 62	AG8	C	350	367	Right-handed alpha
Helix 63	AG9	C	383	390	Right-handed alpha
Helix 64	AH1	C	390	405	Right-handed alpha
Helix 65	AH2	C	418	425	Right-handed alpha
Helix 66	AH3	C	427	431	Right-handed 310
Helix 67	AH4	C	486	492	Right-handed alpha
Helix 68	AH5	C	500	502	Right-handed 310
Helix 69	AH6	C	503	515	Right-handed alpha
Helix 70	AH7	D	16	33	Right-handed alpha
Helix 71	AH8	D	33	45	Right-handed alpha
Helix 72	AH9	D	50	59	Right-handed alpha
Helix 73	AI1	D	109	113	Right-handed 310
Helix 74	AI2	D	115	133	Right-handed alpha
Helix 75	AI3	D	146	149	Right-handed 310
Helix 76	AI4	D	150	168	Right-handed alpha
Helix 77	AI5	D	186	192	Right-handed alpha
Helix 78	AI6	D	208	213	Right-handed alpha
Helix 79	AI7	D	221	227	Right-handed alpha
Helix 80	AI8	D	227	234	Right-handed alpha
Helix 81	AI9	D	244	259	Right-handed alpha
Helix 82	AJ1	D	279	285	Right-handed alpha
Helix 83	AJ2	D	298	307	Right-handed alpha
Helix 84	AJ3	D	308	311	Right-handed 310
Helix 85	AJ4	D	344	348	Right-handed 310
Helix 86	AJ5	D	350	367	Right-handed alpha
Helix 87	AJ6	D	383	389	Right-handed alpha
Helix 88	AJ7	D	390	405	Right-handed alpha
Helix 89	AJ8	D	419	425	Right-handed alpha
Helix 90	AJ9	D	427	431	Right-handed 310
Helix 91	AK1	D	486	492	Right-handed alpha
Helix 92	AK2	D	500	502	Right-handed 310
Helix 93	AK3	D	503	515	Right-handed alpha
Helix 94	AK4	E	17	33	Right-handed alpha
Helix 95	AK5	E	33	45	Right-handed alpha
Helix 96	AK6	E	50	59	Right-handed alpha
Helix 97	AK7	E	109	113	Right-handed 310
Helix 98	AK8	E	115	133	Right-handed alpha
Helix 99	AK9	E	146	149	Right-handed 310
Helix 100	AL1	E	150	168	Right-handed alpha
Helix 101	AL2	E	183	185	Right-handed 310
Helix 102	AL3	E	186	192	Right-handed alpha
Helix 103	AL4	E	221	227	Right-handed alpha
Helix 104	AL5	E	227	234	Right-handed alpha
Helix 105	AL6	E	244	257	Right-handed alpha
Helix 106	AL7	E	279	285	Right-handed alpha
Helix 107	AL8	E	286	288	Right-handed 310
Helix 108	AL9	E	299	307	Right-handed alpha
Helix 109	AM1	E	308	311	Right-handed 310
Helix 110	AM2	E	344	348	Right-handed 310
Helix 111	AM3	E	350	367	Right-handed alpha
Helix 112	AM4	E	383	389	Right-handed alpha
Helix 113	AM5	E	390	405	Right-handed alpha
Helix 114	AM6	E	419	425	Right-handed alpha
Helix 115	AM7	E	486	493	Right-handed alpha
Helix 116	AM8	E	500	502	Right-handed 310
Helix 117	AM9	E	503	515	Right-handed alpha
Helix 118	AN1	F	17	33	Right-handed alpha
Helix 119	AN2	F	33	46	Right-handed alpha
Helix 120	AN3	F	50	59	Right-handed alpha
Helix 121	AN4	F	109	113	Right-handed 310
Helix 122	AN5	F	115	133	Right-handed alpha
Helix 123	AN6	F	146	149	Right-handed 310
Helix 124	AN7	F	150	168	Right-handed alpha
Helix 125	AN8	F	186	192	Right-handed alpha
Helix 126	AN9	F	208	215	Right-handed alpha
Helix 127	AO1	F	221	227	Right-handed alpha
Helix 128	AO2	F	227	234	Right-handed alpha
Helix 129	AO3	F	244	257	Right-handed alpha
Helix 130	AO4	F	279	289	Right-handed alpha
Helix 131	AO5	F	299	307	Right-handed alpha
Helix 132	AO6	F	308	311	Right-handed 310
Helix 133	AO7	F	344	348	Right-handed 310
Helix 134	AO8	F	350	367	Right-handed alpha
Helix 135	AO9	F	383	389	Right-handed alpha
Helix 136	AP1	F	390	396	Right-handed alpha
Helix 137	AP2	F	396	405	Right-handed alpha
Helix 138	AP3	F	419	425	Right-handed alpha
Helix 139	AP4	F	450	455	Right-handed alpha
Helix 140	AP5	F	475	479	Right-handed alpha
Helix 141	AP6	F	486	492	Right-handed alpha
Helix 142	AP7	F	500	502	Right-handed 310
Helix 143	AP8	F	503	515	Right-handed alpha

There are 22 sheets in PDB entry 5INF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	65	67	first strand
Strand 2	A	88	95	anti-parallel
Strand 3	A	98	105	anti-parallel
Strand 4	A	136	140	parallel
Strand 5	A	173	177	parallel
Strand 6	A	194	198	parallel
Strand 7	A	240	242	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	180	182	first strand
Strand 2	A	203	205	parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	313	315	first strand
Strand 2	A	323	330	anti-parallel
Strand 3	A	333	340	anti-parallel
Strand 4	A	371	377	parallel
Strand 5	A	409	418	parallel
Strand 6	A	442	444	parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	313	315	first strand
Strand 2	A	323	330	anti-parallel
Strand 3	A	333	340	anti-parallel
Strand 4	A	371	377	parallel
Strand 5	A	409	418	parallel
Strand 6	A	434	437	parallel
Strand 7	A	497	498	parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	65	67	first strand
Strand 2	B	88	95	anti-parallel
Strand 3	B	98	105	anti-parallel
Strand 4	B	136	140	parallel
Strand 5	B	173	177	parallel
Strand 6	B	194	198	parallel
Strand 7	B	240	242	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	180	182	first strand
Strand 2	B	203	205	parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	313	315	first strand
Strand 2	B	323	330	anti-parallel
Strand 3	B	333	340	anti-parallel
Strand 4	B	371	377	parallel
Strand 5	B	409	418	parallel
Strand 6	B	442	444	parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	313	315	first strand
Strand 2	B	323	330	anti-parallel
Strand 3	B	333	340	anti-parallel
Strand 4	B	371	377	parallel
Strand 5	B	409	418	parallel
Strand 6	B	434	437	parallel
Strand 7	B	497	498	parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	65	67	first strand
Strand 2	C	88	95	anti-parallel
Strand 3	C	98	105	anti-parallel
Strand 4	C	136	140	parallel
Strand 5	C	173	177	parallel
Strand 6	C	194	198	parallel
Strand 7	C	240	242	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	180	182	first strand
Strand 2	C	203	205	parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	313	315	first strand
Strand 2	C	323	330	anti-parallel
Strand 3	C	333	340	anti-parallel
Strand 4	C	371	375	parallel
Strand 5	C	409	413	parallel
Strand 6	C	434	437	parallel
Strand 7	C	497	498	parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	65	67	first strand
Strand 2	D	88	95	anti-parallel
Strand 3	D	98	105	anti-parallel
Strand 4	D	136	142	parallel
Strand 5	D	173	182	parallel
Strand 6	D	203	205	parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	65	67	first strand
Strand 2	D	88	95	anti-parallel
Strand 3	D	98	105	anti-parallel
Strand 4	D	136	142	parallel
Strand 5	D	173	182	parallel
Strand 6	D	194	198	parallel
Strand 7	D	240	242	parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	313	315	first strand
Strand 2	D	323	330	anti-parallel
Strand 3	D	333	340	anti-parallel
Strand 4	D	371	377	parallel
Strand 5	D	409	418	parallel
Strand 6	D	442	444	parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	313	315	first strand
Strand 2	D	323	330	anti-parallel
Strand 3	D	333	340	anti-parallel
Strand 4	D	371	377	parallel
Strand 5	D	409	418	parallel
Strand 6	D	434	437	parallel
Strand 7	D	497	498	parallel

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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	65	67	first strand
Strand 2	E	88	95	anti-parallel
Strand 3	E	98	105	anti-parallel
Strand 4	E	136	142	parallel
Strand 5	E	173	181	parallel
Strand 6	E	194	198	parallel
Strand 7	E	240	242	parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	313	315	first strand
Strand 2	E	323	330	anti-parallel
Strand 3	E	333	340	anti-parallel
Strand 4	E	371	377	parallel
Strand 5	E	409	418	parallel
Strand 6	E	442	444	parallel

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There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	313	315	first strand
Strand 2	E	323	330	anti-parallel
Strand 3	E	333	340	anti-parallel
Strand 4	E	371	377	parallel
Strand 5	E	409	418	parallel
Strand 6	E	434	437	parallel
Strand 7	E	497	498	parallel

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There are 7 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	65	67	first strand
Strand 2	F	88	95	anti-parallel
Strand 3	F	98	105	anti-parallel
Strand 4	F	136	140	parallel
Strand 5	F	173	177	parallel
Strand 6	F	194	198	parallel
Strand 7	F	240	242	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	180	182	first strand
Strand 2	F	203	205	parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	313	315	first strand
Strand 2	F	323	330	anti-parallel
Strand 3	F	333	340	anti-parallel
Strand 4	F	371	377	parallel
Strand 5	F	409	418	parallel
Strand 6	F	442	444	parallel

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There are 7 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	313	315	first strand
Strand 2	F	323	330	anti-parallel
Strand 3	F	333	340	anti-parallel
Strand 4	F	371	377	parallel
Strand 5	F	409	418	parallel
Strand 6	F	434	437	parallel
Strand 7	F	497	498	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5INF

Analysis of interatomic Contacts of Structural Units in PDB entry:
5INF