Analysis of interatomic Contacts of Structural Units in PDB entry:
5INR

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5INR entry

There are 5 chains in PDB entry 5INR (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	CYS 9	ASP 469
B	CYS 9	ASP 469
C	CYS 9	ASP 469
D	CYS 9	ASP 469
E	CYS 9	ASP 469

There are 90 helices in PDB entry 5INR. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	45	49	Right-handed 310
Helix 2	AA2	A	105	112	Right-handed alpha
Helix 3	AA3	A	123	129	Right-handed alpha
Helix 4	AA4	A	130	132	Right-handed 310
Helix 5	AA5	A	134	150	Right-handed alpha
Helix 6	AA6	A	210	218	Right-handed alpha
Helix 7	AA7	A	228	234	Right-handed alpha
Helix 8	AA8	A	237	244	Right-handed alpha
Helix 9	AA9	A	244	256	Right-handed alpha
Helix 10	AB1	A	257	260	Right-handed 310
Helix 11	AB2	A	280	289	Right-handed alpha
Helix 12	AB3	A	304	309	Right-handed alpha
Helix 13	AB4	A	332	335	Right-handed 310
Helix 14	AB5	A	345	349	Right-handed 310
Helix 15	AB6	A	362	367	Right-handed alpha
Helix 16	AB7	A	376	391	Right-handed alpha
Helix 17	AB8	A	391	420	Right-handed alpha
Helix 18	AB9	A	426	460	Right-handed alpha
Helix 19	AC1	B	45	49	Right-handed 310
Helix 20	AC2	B	105	110	Right-handed alpha
Helix 21	AC3	B	123	129	Right-handed alpha
Helix 22	AC4	B	130	132	Right-handed 310
Helix 23	AC5	B	134	150	Right-handed alpha
Helix 24	AC6	B	210	218	Right-handed alpha
Helix 25	AC7	B	228	234	Right-handed alpha
Helix 26	AC8	B	237	244	Right-handed alpha
Helix 27	AC9	B	244	256	Right-handed alpha
Helix 28	AD1	B	257	260	Right-handed 310
Helix 29	AD2	B	280	289	Right-handed alpha
Helix 30	AD3	B	304	309	Right-handed alpha
Helix 31	AD4	B	332	335	Right-handed 310
Helix 32	AD5	B	345	349	Right-handed 310
Helix 33	AD6	B	362	367	Right-handed alpha
Helix 34	AD7	B	376	390	Right-handed alpha
Helix 35	AD8	B	391	420	Right-handed alpha
Helix 36	AD9	B	426	460	Right-handed alpha
Helix 37	AE1	C	45	49	Right-handed 310
Helix 38	AE2	C	105	110	Right-handed alpha
Helix 39	AE3	C	123	129	Right-handed alpha
Helix 40	AE4	C	130	132	Right-handed 310
Helix 41	AE5	C	134	150	Right-handed alpha
Helix 42	AE6	C	210	218	Right-handed alpha
Helix 43	AE7	C	228	234	Right-handed alpha
Helix 44	AE8	C	237	244	Right-handed alpha
Helix 45	AE9	C	244	256	Right-handed alpha
Helix 46	AF1	C	257	260	Right-handed 310
Helix 47	AF2	C	280	289	Right-handed alpha
Helix 48	AF3	C	304	309	Right-handed alpha
Helix 49	AF4	C	332	335	Right-handed 310
Helix 50	AF5	C	345	349	Right-handed 310
Helix 51	AF6	C	362	367	Right-handed alpha
Helix 52	AF7	C	376	391	Right-handed alpha
Helix 53	AF8	C	391	420	Right-handed alpha
Helix 54	AF9	C	426	460	Right-handed alpha
Helix 55	AG1	D	45	49	Right-handed 310
Helix 56	AG2	D	105	110	Right-handed alpha
Helix 57	AG3	D	123	129	Right-handed alpha
Helix 58	AG4	D	130	132	Right-handed 310
Helix 59	AG5	D	134	150	Right-handed alpha
Helix 60	AG6	D	210	218	Right-handed alpha
Helix 61	AG7	D	228	234	Right-handed alpha
Helix 62	AG8	D	237	244	Right-handed alpha
Helix 63	AG9	D	244	256	Right-handed alpha
Helix 64	AH1	D	257	260	Right-handed 310
Helix 65	AH2	D	280	289	Right-handed alpha
Helix 66	AH3	D	304	309	Right-handed alpha
Helix 67	AH4	D	332	335	Right-handed 310
Helix 68	AH5	D	345	349	Right-handed 310
Helix 69	AH6	D	362	367	Right-handed alpha
Helix 70	AH7	D	376	391	Right-handed alpha
Helix 71	AH8	D	391	420	Right-handed alpha
Helix 72	AH9	D	426	460	Right-handed alpha
Helix 73	AI1	E	45	49	Right-handed 310
Helix 74	AI2	E	105	110	Right-handed alpha
Helix 75	AI3	E	123	129	Right-handed alpha
Helix 76	AI4	E	130	132	Right-handed 310
Helix 77	AI5	E	134	150	Right-handed alpha
Helix 78	AI6	E	210	218	Right-handed alpha
Helix 79	AI7	E	228	234	Right-handed alpha
Helix 80	AI8	E	237	244	Right-handed alpha
Helix 81	AI9	E	244	256	Right-handed alpha
Helix 82	AJ1	E	257	260	Right-handed 310
Helix 83	AJ2	E	280	289	Right-handed alpha
Helix 84	AJ3	E	304	309	Right-handed alpha
Helix 85	AJ4	E	332	335	Right-handed 310
Helix 86	AJ5	E	345	349	Right-handed 310
Helix 87	AJ6	E	362	367	Right-handed alpha
Helix 88	AJ7	E	376	391	Right-handed alpha
Helix 89	AJ8	E	391	420	Right-handed alpha
Helix 90	AJ9	E	426	460	Right-handed alpha

There are 20 sheets in PDB entry 5INR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	186	189	first strand
Strand 2	A	11	14	anti-parallel
Strand 3	A	24	31	anti-parallel
Strand 4	A	319	327	anti-parallel
Strand 5	A	337	343	anti-parallel
Strand 6	A	352	355	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	42	44	first strand
Strand 2	A	71	73	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	52	54	first strand
Strand 2	A	61	63	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	87	89	first strand
Strand 2	A	95	101	anti-parallel
Strand 3	A	155	160	anti-parallel
Strand 4	A	165	171	anti-parallel
Strand 5	A	175	180	anti-parallel
Strand 6	A	205	207	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	186	189	first strand
Strand 2	B	11	14	anti-parallel
Strand 3	B	24	31	anti-parallel
Strand 4	B	319	327	anti-parallel
Strand 5	B	337	343	anti-parallel
Strand 6	B	352	355	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	42	44	first strand
Strand 2	B	71	73	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	52	54	first strand
Strand 2	B	61	63	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	87	89	first strand
Strand 2	B	95	101	anti-parallel
Strand 3	B	155	160	anti-parallel
Strand 4	B	165	171	anti-parallel
Strand 5	B	175	181	anti-parallel
Strand 6	B	205	207	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	186	189	first strand
Strand 2	C	11	14	anti-parallel
Strand 3	C	24	31	anti-parallel
Strand 4	C	319	327	anti-parallel
Strand 5	C	337	343	anti-parallel
Strand 6	C	352	355	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	42	44	first strand
Strand 2	C	71	73	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	52	54	first strand
Strand 2	C	61	63	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	87	89	first strand
Strand 2	C	95	101	anti-parallel
Strand 3	C	155	160	anti-parallel
Strand 4	C	165	171	anti-parallel
Strand 5	C	175	181	anti-parallel
Strand 6	C	205	207	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	186	189	first strand
Strand 2	D	11	14	anti-parallel
Strand 3	D	24	31	anti-parallel
Strand 4	D	319	327	anti-parallel
Strand 5	D	337	343	anti-parallel
Strand 6	D	352	355	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	42	44	first strand
Strand 2	D	71	73	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	52	54	first strand
Strand 2	D	61	63	anti-parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	87	89	first strand
Strand 2	D	95	101	anti-parallel
Strand 3	D	155	160	anti-parallel
Strand 4	D	165	171	anti-parallel
Strand 5	D	175	181	anti-parallel
Strand 6	D	205	207	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	186	189	first strand
Strand 2	E	11	14	anti-parallel
Strand 3	E	24	31	anti-parallel
Strand 4	E	319	327	anti-parallel
Strand 5	E	337	343	anti-parallel
Strand 6	E	352	355	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	42	44	first strand
Strand 2	E	71	73	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	52	54	first strand
Strand 2	E	61	63	anti-parallel

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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	87	89	first strand
Strand 2	E	95	101	anti-parallel
Strand 3	E	155	160	anti-parallel
Strand 4	E	165	171	anti-parallel
Strand 5	E	175	180	anti-parallel
Strand 6	E	205	207	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5INR

Analysis of interatomic Contacts of Structural Units in PDB entry:
5INR