Analysis of interatomic Contacts of Structural Units in PDB entry:
5IOV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5IOV entry

There are 4 chains in PDB entry 5IOV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 23	ALA 826
C	ASP 23	ALA 826
B	PRO 28	PHE 825
D	PRO 28	PHE 825

There are 98 helices in PDB entry 5IOV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	35	53	Right-handed alpha
Helix 2	AA2	A	70	80	Right-handed alpha
Helix 3	AA3	A	104	114	Right-handed alpha
Helix 4	AA4	A	125	130	Right-handed 310
Helix 5	AA5	A	143	158	Right-handed alpha
Helix 6	AA6	A	170	184	Right-handed alpha
Helix 7	AA7	A	204	214	Right-handed alpha
Helix 8	AA8	A	224	237	Right-handed alpha
Helix 9	AA9	A	277	296	Right-handed alpha
Helix 10	AB1	A	318	327	Right-handed alpha
Helix 11	AB2	A	456	467	Right-handed alpha
Helix 12	AB3	A	518	523	Right-handed alpha
Helix 13	AB4	A	557	579	Right-handed alpha
Helix 14	AB5	A	591	605	Right-handed alpha
Helix 15	AB6	A	616	647	Right-handed alpha
Helix 16	AB7	A	659	664	Right-handed alpha
Helix 17	AB8	A	677	686	Right-handed alpha
Helix 18	AB9	A	692	698	Right-handed alpha
Helix 19	AC1	A	703	713	Right-handed alpha
Helix 20	AC2	A	723	734	Right-handed alpha
Helix 21	AC3	A	758	772	Right-handed alpha
Helix 22	AC4	A	773	783	Right-handed alpha
Helix 23	AC5	A	794	798	Right-handed 310
Helix 24	AC6	A	799	826	Right-handed alpha
Helix 25	AC7	C	35	53	Right-handed alpha
Helix 26	AC8	C	70	80	Right-handed alpha
Helix 27	AC9	C	104	114	Right-handed alpha
Helix 28	AD1	C	125	130	Right-handed 310
Helix 29	AD2	C	143	158	Right-handed alpha
Helix 30	AD3	C	170	184	Right-handed alpha
Helix 31	AD4	C	204	214	Right-handed alpha
Helix 32	AD5	C	224	237	Right-handed alpha
Helix 33	AD6	C	255	259	Right-handed 310
Helix 34	AD7	C	277	296	Right-handed alpha
Helix 35	AD8	C	316	327	Right-handed alpha
Helix 36	AD9	C	456	467	Right-handed alpha
Helix 37	AE1	C	518	523	Right-handed alpha
Helix 38	AE2	C	557	578	Right-handed alpha
Helix 39	AE3	C	591	605	Right-handed alpha
Helix 40	AE4	C	616	647	Right-handed alpha
Helix 41	AE5	C	659	664	Right-handed alpha
Helix 42	AE6	C	677	686	Right-handed alpha
Helix 43	AE7	C	692	698	Right-handed alpha
Helix 44	AE8	C	703	713	Right-handed alpha
Helix 45	AE9	C	723	734	Right-handed alpha
Helix 46	AF1	C	757	772	Right-handed alpha
Helix 47	AF2	C	773	783	Right-handed alpha
Helix 48	AF3	C	799	826	Right-handed alpha
Helix 49	AF4	B	42	47	Right-handed alpha
Helix 50	AF5	B	51	55	Right-handed 310
Helix 51	AF6	B	72	87	Right-handed alpha
Helix 52	AF7	B	100	115	Right-handed alpha
Helix 53	AF8	B	123	127	Right-handed 310
Helix 54	AF9	B	144	159	Right-handed alpha
Helix 55	AG1	B	174	186	Right-handed alpha
Helix 56	AG2	B	210	216	Right-handed alpha
Helix 57	AG3	B	228	242	Right-handed alpha
Helix 58	AG4	B	283	306	Right-handed alpha
Helix 59	AG5	B	328	333	Right-handed alpha
Helix 60	AG6	B	452	466	Right-handed alpha
Helix 61	AG7	B	491	496	Right-handed alpha
Helix 62	AG8	B	511	516	Right-handed alpha
Helix 63	AG9	B	550	568	Right-handed alpha
Helix 64	AH1	B	578	597	Right-handed alpha
Helix 65	AH2	B	608	639	Right-handed alpha
Helix 66	AH3	B	651	655	Right-handed 310
Helix 67	AH4	B	672	682	Right-handed alpha
Helix 68	AH5	B	682	688	Right-handed alpha
Helix 69	AH6	B	697	707	Right-handed alpha
Helix 70	AH7	B	716	725	Right-handed alpha
Helix 71	AH8	B	756	767	Right-handed alpha
Helix 72	AH9	B	770	777	Right-handed alpha
Helix 73	AI1	B	799	825	Right-handed alpha
Helix 74	AI2	D	42	47	Right-handed alpha
Helix 75	AI3	D	51	55	Right-handed 310
Helix 76	AI4	D	72	87	Right-handed alpha
Helix 77	AI5	D	101	115	Right-handed alpha
Helix 78	AI6	D	123	127	Right-handed 310
Helix 79	AI7	D	144	159	Right-handed alpha
Helix 80	AI8	D	174	186	Right-handed alpha
Helix 81	AI9	D	210	216	Right-handed alpha
Helix 82	AJ1	D	228	243	Right-handed alpha
Helix 83	AJ2	D	283	306	Right-handed alpha
Helix 84	AJ3	D	328	333	Right-handed alpha
Helix 85	AJ4	D	452	466	Right-handed alpha
Helix 86	AJ5	D	491	496	Right-handed alpha
Helix 87	AJ6	D	511	516	Right-handed alpha
Helix 88	AJ7	D	550	568	Right-handed alpha
Helix 89	AJ8	D	578	597	Right-handed alpha
Helix 90	AJ9	D	608	639	Right-handed alpha
Helix 91	AK1	D	651	655	Right-handed 310
Helix 92	AK2	D	672	682	Right-handed alpha
Helix 93	AK3	D	682	688	Right-handed alpha
Helix 94	AK4	D	696	707	Right-handed alpha
Helix 95	AK5	D	716	725	Right-handed alpha
Helix 96	AK6	D	757	767	Right-handed alpha
Helix 97	AK7	D	770	779	Right-handed alpha
Helix 98	AK8	D	799	825	Right-handed alpha

There are 33 sheets in PDB entry 5IOV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	58	66	first strand
Strand 2	A	25	33	parallel
Strand 3	A	87	92	parallel
Strand 4	A	118	120	parallel
Strand 5	A	137	139	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	163	167	first strand
Strand 2	A	218	222	parallel
Strand 3	A	246	248	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	267	271	first strand
Strand 2	A	351	357	anti-parallel
Strand 3	A	360	363	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	365	367	first strand
Strand 2	A	372	374	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	472	476	first strand
Strand 2	A	398	402	parallel
Strand 3	A	510	511	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	409	413	first strand
Strand 2	A	449	455	anti-parallel
Strand 3	A	434	438	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	526	527	first strand
Strand 2	A	751	752	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	671	673	first strand
Strand 2	A	718	722	parallel
Strand 3	A	532	537	anti-parallel
Strand 4	A	743	748	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	58	66	first strand
Strand 2	C	25	33	parallel
Strand 3	C	87	91	parallel
Strand 4	C	118	120	parallel
Strand 5	C	137	139	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	191	195	first strand
Strand 2	C	163	167	parallel
Strand 3	C	218	222	parallel
Strand 4	C	246	248	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	267	271	first strand
Strand 2	C	351	357	anti-parallel
Strand 3	C	360	363	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	329	330	first strand
Strand 2	C	338	339	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	365	367	first strand
Strand 2	C	372	374	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	471	476	first strand
Strand 2	C	397	402	parallel
Strand 3	C	510	511	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	409	413	first strand
Strand 2	C	449	455	anti-parallel
Strand 3	C	434	438	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	515	516	first strand
Strand 2	C	745	749	anti-parallel
Strand 3	C	533	537	anti-parallel
Strand 4	C	721	722	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	526	527	first strand
Strand 2	C	751	752	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	60	68	first strand
Strand 2	B	29	37	parallel
Strand 3	B	93	95	parallel
Strand 4	B	118	120	parallel
Strand 5	B	138	140	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	193	199	first strand
Strand 2	B	163	168	parallel
Strand 3	B	222	226	parallel
Strand 4	B	250	252	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	273	277	first strand
Strand 2	B	356	362	anti-parallel
Strand 3	B	368	375	anti-parallel
Strand 4	B	379	380	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	401	402	first strand
Strand 2	B	501	502	parallel
Strand 3	B	748	749	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	411	413	first strand
Strand 2	B	448	451	anti-parallel
Strand 3	B	427	429	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	432	433	first strand
Strand 2	B	444	445	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	481	483	first strand
Strand 2	B	486	488	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	666	667	first strand
Strand 2	B	711	715	parallel
Strand 3	B	523	529	anti-parallel
Strand 4	B	740	745	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	60	68	first strand
Strand 2	D	29	37	parallel
Strand 3	D	89	95	parallel
Strand 4	D	118	120	parallel
Strand 5	D	138	140	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	193	194	first strand
Strand 2	D	163	168	parallel
Strand 3	D	198	199	parallel

Back to list of sheets
Back to top of page

There are 8 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	193	194	first strand
Strand 2	D	163	168	parallel
Strand 3	D	222	226	parallel
Strand 4	D	250	253	parallel
Strand 5	D	272	276	parallel
Strand 6	D	357	362	anti-parallel
Strand 7	D	368	374	anti-parallel
Strand 8	D	379	380	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	401	402	first strand
Strand 2	D	501	502	parallel
Strand 3	D	748	749	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	411	413	first strand
Strand 2	D	448	451	anti-parallel
Strand 3	D	427	429	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	432	433	first strand
Strand 2	D	444	445	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	481	483	first strand
Strand 2	D	486	488	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	666	667	first strand
Strand 2	D	711	715	parallel
Strand 3	D	523	529	anti-parallel
Strand 4	D	740	745	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5IOV

Analysis of interatomic Contacts of Structural Units in PDB entry:
5IOV