Analysis of interatomic Contacts of Structural Units in PDB entry:
5IS0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5IS0 entry

There are 4 chains in PDB entry 5IS0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 THR 335THR 751
B
 THR 335THR 751
D
 THR 335THR 751
E
 THR 335THR 751
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 72 helices in PDB entry 5IS0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
335 344Right-handed alpha
Helix 2
AA2
C
345 353Right-handed alpha
Helix 3
AA3
C
394 401Right-handed alpha
Helix 4
AA4
C
411 414Right-handed 310
Helix 5
AA5
C
415 429Right-handed alpha
Helix 6
AA6
C
429 454Right-handed alpha
Helix 7
AA7
C
469 500Right-handed alpha
Helix 8
AA8
C
505 510Right-handed alpha
Helix 9
AA9
C
513 532Right-handed alpha
Helix 10
AB1
C
536 551Right-handed alpha
Helix 11
AB2
C
552 557Right-handed 310
Helix 12
AB3
C
559 577Right-handed alpha
Helix 13
AB4
C
579 597Right-handed alpha
Helix 14
AB5
C
602 628Right-handed 310
Helix 15
AB6
C
629 637Right-handed alpha
Helix 16
AB7
C
638 643Right-handed alpha
Helix 17
AB8
C
655 671Right-handed alpha
Helix 18
AB9
C
673 712Right-handed alpha
Helix 19
AC1
B
336 344Right-handed alpha
Helix 20
AC2
B
345 353Right-handed alpha
Helix 21
AC3
B
394 401Right-handed alpha
Helix 22
AC4
B
411 414Right-handed 310
Helix 23
AC5
B
415 429Right-handed alpha
Helix 24
AC6
B
429 454Right-handed alpha
Helix 25
AC7
B
469 500Right-handed alpha
Helix 26
AC8
B
505 510Right-handed alpha
Helix 27
AC9
B
513 532Right-handed alpha
Helix 28
AD1
B
536 551Right-handed alpha
Helix 29
AD2
B
552 557Right-handed 310
Helix 30
AD3
B
559 577Right-handed alpha
Helix 31
AD4
B
579 597Right-handed alpha
Helix 32
AD5
B
602 628Right-handed 310
Helix 33
AD6
B
629 637Right-handed alpha
Helix 34
AD7
B
638 643Right-handed alpha
Helix 35
AD8
B
655 671Right-handed alpha
Helix 36
AD9
B
673 712Right-handed alpha
Helix 37
AE1
D
336 344Right-handed alpha
Helix 38
AE2
D
345 353Right-handed alpha
Helix 39
AE3
D
394 401Right-handed alpha
Helix 40
AE4
D
411 414Right-handed 310
Helix 41
AE5
D
415 429Right-handed alpha
Helix 42
AE6
D
429 454Right-handed alpha
Helix 43
AE7
D
469 500Right-handed alpha
Helix 44
AE8
D
505 510Right-handed alpha
Helix 45
AE9
D
513 532Right-handed alpha
Helix 46
AF1
D
536 551Right-handed alpha
Helix 47
AF2
D
552 557Right-handed 310
Helix 48
AF3
D
559 577Right-handed alpha
Helix 49
AF4
D
579 597Right-handed alpha
Helix 50
AF5
D
602 628Right-handed 310
Helix 51
AF6
D
629 637Right-handed alpha
Helix 52
AF7
D
638 643Right-handed alpha
Helix 53
AF8
D
655 671Right-handed alpha
Helix 54
AF9
D
673 712Right-handed alpha
Helix 55
AG1
E
336 344Right-handed alpha
Helix 56
AG2
E
345 353Right-handed alpha
Helix 57
AG3
E
394 401Right-handed alpha
Helix 58
AG4
E
411 414Right-handed 310
Helix 59
AG5
E
415 429Right-handed alpha
Helix 60
AG6
E
429 454Right-handed alpha
Helix 61
AG7
E
469 500Right-handed alpha
Helix 62
AG8
E
505 510Right-handed alpha
Helix 63
AG9
E
513 532Right-handed alpha
Helix 64
AH1
E
536 551Right-handed alpha
Helix 65
AH2
E
552 557Right-handed 310
Helix 66
AH3
E
559 577Right-handed alpha
Helix 67
AH4
E
579 597Right-handed alpha
Helix 68
AH5
E
602 628Right-handed 310
Helix 69
AH6
E
629 637Right-handed alpha
Helix 70
AH7
E
638 643Right-handed alpha
Helix 71
AH8
E
655 671Right-handed alpha
Helix 72
AH9
E
673 712Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 5IS0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
368 372first strand
Strand 2
C
379 382anti-parallel
Strand 3
C
743 744anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
368 372first strand
Strand 2
B
379 382anti-parallel
Strand 3
B
743 744anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
368 372first strand
Strand 2
D
379 382anti-parallel
Strand 3
D
743 744anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
368 372first strand
Strand 2
E
379 382anti-parallel
Strand 3
E
743 744anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il