Analysis of interatomic Contacts of Structural Units in PDB entry:
5IUU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5IUU entry

There are 2 chains in PDB entry 5IUU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 3LEU 497
B
 THR 3LEU 497
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 5IUU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 16Right-handed alpha
Helix 2
AA2
A
55 73Right-handed alpha
Helix 3
AA3
A
79 97Right-handed alpha
Helix 4
AA4
A
97 110Right-handed alpha
Helix 5
AA5
A
112 119Right-handed alpha
Helix 6
AA6
A
119 135Right-handed alpha
Helix 7
AA7
A
136 138Right-handed 310
Helix 8
AA8
A
169 184Right-handed alpha
Helix 9
AA9
A
197 211Right-handed alpha
Helix 10
AB1
A
226 233Right-handed alpha
Helix 11
AB2
A
245 259Right-handed alpha
Helix 12
AB3
A
282 295Right-handed alpha
Helix 13
AB4
A
312 328Right-handed alpha
Helix 14
AB5
A
414 424Right-handed alpha
Helix 15
AB6
A
437 448Right-handed alpha
Helix 16
AB7
A
470 474Right-handed 310
Helix 17
AB8
A
480 486Right-handed 310
Helix 18
AB9
B
5 16Right-handed alpha
Helix 19
AC1
B
55 73Right-handed alpha
Helix 20
AC2
B
79 97Right-handed alpha
Helix 21
AC3
B
97 110Right-handed alpha
Helix 22
AC4
B
112 119Right-handed alpha
Helix 23
AC5
B
119 135Right-handed alpha
Helix 24
AC6
B
136 138Right-handed 310
Helix 25
AC7
B
169 184Right-handed alpha
Helix 26
AC8
B
197 211Right-handed alpha
Helix 27
AC9
B
226 233Right-handed alpha
Helix 28
AD1
B
245 259Right-handed alpha
Helix 29
AD2
B
282 292Right-handed alpha
Helix 30
AD3
B
312 327Right-handed alpha
Helix 31
AD4
B
414 424Right-handed alpha
Helix 32
AD5
B
437 448Right-handed alpha
Helix 33
AD6
B
470 474Right-handed 310
Helix 34
AD7
B
480 486Right-handed 310
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There are 11 sheets in PDB entry 5IUU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 24first strand
Strand 2
A
27 29anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 40first strand
Strand 2
A
47 52anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
141 142first strand
Strand 2
A
149 157anti-parallel
Strand 3
A
488 496anti-parallel
Strand 4
B
452 455parallel
Strand 5
B
430 434parallel
Strand 6
B
274 276parallel
Strand 7
B
307 311parallel
Strand 8
B
408 412parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
217 219first strand
Strand 2
A
187 191parallel
Strand 3
A
160 164parallel
Strand 4
A
239 244parallel
Strand 5
A
263 268parallel
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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
400 402first strand
Strand 2
A
408 412anti-parallel
Strand 3
A
307 311parallel
Strand 4
A
273 276parallel
Strand 5
A
430 434parallel
Strand 6
A
452 455parallel
Strand 7
B
488 496parallel
Strand 8
B
149 157anti-parallel
Strand 9
B
141 142anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
331 332first strand
Strand 2
A
341 342parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
467 468first strand
Strand 2
A
477 478anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
22 24first strand
Strand 2
B
27 29anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 40first strand
Strand 2
B
47 52anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
217 219first strand
Strand 2
B
187 191parallel
Strand 3
B
160 164parallel
Strand 4
B
239 243parallel
Strand 5
B
263 267parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
331 332first strand
Strand 2
B
341 342parallel
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