Analysis of interatomic Contacts of Structural Units in PDB entry:
5IV0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5IV0 entry

There is 1 chain in PDB entry 5IV0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 3PHE 402
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 5IV0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 11Right-handed 310
Helix 2
AA2
A
12 24Right-handed alpha
Helix 3
AA3
A
29 37Right-handed alpha
Helix 4
AA4
A
38 40Right-handed 310
Helix 5
AA5
A
89 92Right-handed 310
Helix 6
AA6
A
95 112Right-handed alpha
Helix 7
AA7
A
126 130Right-handed 310
Helix 8
AA8
A
167 170Right-handed 310
Helix 9
AA9
A
171 186Right-handed alpha
Helix 10
AB1
A
193 204Right-handed alpha
Helix 11
AB2
A
245 258Right-handed alpha
Helix 12
AB3
A
274 279Right-handed 310
Helix 13
AB4
A
281 283Right-handed 310
Helix 14
AB5
A
300 308Right-handed alpha
Helix 15
AB6
A
352 361Right-handed alpha
Helix 16
AB7
A
365 372Right-handed alpha
Helix 17
AB8
A
379 391Right-handed alpha
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There are 3 sheets in PDB entry 5IV0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 6first strand
Strand 2
A
45 49anti-parallel
Strand 3
A
58 71anti-parallel
Strand 4
A
75 87anti-parallel
Strand 5
A
115 119parallel
Strand 6
A
294 298anti-parallel
Strand 7
A
132 133anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 166first strand
Strand 2
A
214 219anti-parallel
Strand 3
A
222 228anti-parallel
Strand 4
A
235 243anti-parallel
Strand 5
A
264 269parallel
Strand 6
A
136 143anti-parallel
Strand 7
A
285 292anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
337 342first strand
Strand 2
A
327 334anti-parallel
Strand 3
A
317 323anti-parallel
Strand 4
A
349 351parallel
Strand 5
A
375 376anti-parallel
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