Analysis of interatomic Contacts of Structural Units in PDB entry:
5IVL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5IVL entry

There are 2 chains in PDB entry 5IVL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 PHE 4HIS 425
A
 SER 10HIS 424
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 5IVL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
10 19Right-handed alpha
Helix 2
AA2
B
26 38Right-handed alpha
Helix 3
AA3
B
51 64Right-handed alpha
Helix 4
AA4
B
79 94Right-handed alpha
Helix 5
AA5
B
109 118Right-handed alpha
Helix 6
AA6
B
127 137Right-handed alpha
Helix 7
AA7
B
152 157Right-handed 310
Helix 8
AA8
B
161 172Right-handed alpha
Helix 9
AA9
B
186 197Right-handed alpha
Helix 10
AB1
B
223 225Right-handed 310
Helix 11
AB2
B
226 239Right-handed alpha
Helix 12
AB3
B
249 263Right-handed alpha
Helix 13
AB4
B
275 288Right-handed alpha
Helix 14
AB5
B
298 301Right-handed 310
Helix 15
AB6
B
320 329Right-handed alpha
Helix 16
AB7
B
330 331Right-handed 310
Helix 17
AB8
B
332 336Right-handed 310
Helix 18
AB9
B
345 347Right-handed 310
Helix 19
AC1
B
348 360Right-handed alpha
Helix 20
AC2
B
370 393Right-handed alpha
Helix 21
AC3
B
398 407Right-handed alpha
Helix 22
AC4
B
410 424Right-handed alpha
Helix 23
AC5
A
11 19Right-handed alpha
Helix 24
AC6
A
26 38Right-handed alpha
Helix 25
AC7
A
51 64Right-handed alpha
Helix 26
AC8
A
79 94Right-handed alpha
Helix 27
AC9
A
109 117Right-handed alpha
Helix 28
AD1
A
118 120Right-handed 310
Helix 29
AD2
A
127 137Right-handed alpha
Helix 30
AD3
A
152 159Right-handed alpha
Helix 31
AD4
A
161 172Right-handed alpha
Helix 32
AD5
A
186 197Right-handed alpha
Helix 33
AD6
A
223 225Right-handed 310
Helix 34
AD7
A
226 239Right-handed alpha
Helix 35
AD8
A
249 263Right-handed alpha
Helix 36
AD9
A
275 288Right-handed alpha
Helix 37
AE1
A
298 301Right-handed 310
Helix 38
AE2
A
320 329Right-handed alpha
Helix 39
AE3
A
345 347Right-handed 310
Helix 40
AE4
A
348 360Right-handed alpha
Helix 41
AE5
A
370 393Right-handed alpha
Helix 42
AE6
A
395 397Right-handed 310
Helix 43
AE7
A
398 406Right-handed alpha
Helix 44
AE8
A
411 423Right-handed alpha
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There are 4 sheets in PDB entry 5IVL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
101 104first strand
Strand 2
B
123 126parallel
Strand 3
B
73 76parallel
Strand 4
B
147 150parallel
Strand 5
B
177 182parallel
Strand 6
B
42 45parallel
Strand 7
B
201 204parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
267 270first strand
Strand 2
B
293 296parallel
Strand 3
B
243 246parallel
Strand 4
B
311 314parallel
Strand 5
B
338 344parallel
Strand 6
B
215 221parallel
Strand 7
B
364 365parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
101 104first strand
Strand 2
A
123 126parallel
Strand 3
A
73 76parallel
Strand 4
A
147 151parallel
Strand 5
A
177 182parallel
Strand 6
A
42 45parallel
Strand 7
A
201 204parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
267 270first strand
Strand 2
A
293 296parallel
Strand 3
A
243 246parallel
Strand 4
A
311 314parallel
Strand 5
A
339 344parallel
Strand 6
A
216 221parallel
Strand 7
A
364 365parallel
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