Analysis of interatomic Contacts of Structural Units in PDB entry:
5IW7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5IW7 entry

There are 3 chains in PDB entry 5IW7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 67	GLY 787
B	ILE 70	ASN 786
C	GLU 71	THR 335

There are 57 helices in PDB entry 5IW7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	67	75	Right-handed alpha
Helix 2	AA2	A	96	106	Right-handed alpha
Helix 3	AA3	A	110	114	Right-handed 310
Helix 4	AA4	A	144	154	Right-handed alpha
Helix 5	AA5	A	172	184	Right-handed alpha
Helix 6	AA6	A	194	198	Right-handed 310
Helix 7	AA7	A	201	220	Right-handed alpha
Helix 8	AA8	A	231	245	Right-handed alpha
Helix 9	AA9	A	250	255	Right-handed alpha
Helix 10	AB1	A	353	356	Right-handed 310
Helix 11	AB2	A	481	483	Right-handed 310
Helix 12	AB3	A	493	498	Right-handed alpha
Helix 13	AB4	A	524	528	Right-handed 310
Helix 14	AB5	A	533	548	Right-handed alpha
Helix 15	AB6	A	566	571	Right-handed 310
Helix 16	AB7	A	723	730	Right-handed alpha
Helix 17	AB8	B	72	76	Right-handed 310
Helix 18	AB9	B	96	106	Right-handed alpha
Helix 19	AC1	B	144	155	Right-handed alpha
Helix 20	AC2	B	172	184	Right-handed alpha
Helix 21	AC3	B	194	198	Right-handed 310
Helix 22	AC4	B	204	220	Right-handed alpha
Helix 23	AC5	B	231	245	Right-handed alpha
Helix 24	AC6	B	250	255	Right-handed alpha
Helix 25	AC7	B	353	356	Right-handed 310
Helix 26	AC8	B	493	498	Right-handed alpha
Helix 27	AC9	B	524	528	Right-handed 310
Helix 28	AD1	B	533	548	Right-handed alpha
Helix 29	AD2	B	566	571	Right-handed 310
Helix 30	AD3	B	723	730	Right-handed alpha
Helix 31	AD4	C	73	81	Right-handed alpha
Helix 32	AD5	C	96	106	Right-handed alpha
Helix 33	AD6	C	144	155	Right-handed alpha
Helix 34	AD7	C	172	184	Right-handed alpha
Helix 35	AD8	C	207	220	Right-handed alpha
Helix 36	AD9	C	231	244	Right-handed alpha
Helix 37	AE1	C	250	255	Right-handed alpha
Helix 38	AE2	C	353	356	Right-handed 310
Helix 39	AE3	C	365	369	Right-handed 310
Helix 40	AE4	C	481	483	Right-handed 310
Helix 41	AE5	C	493	498	Right-handed alpha
Helix 42	AE6	C	524	528	Right-handed 310
Helix 43	AE7	C	533	548	Right-handed alpha
Helix 44	AE8	C	564	571	Right-handed 310
Helix 45	AE9	C	723	730	Right-handed alpha
Helix 46	AF1	D	96	106	Right-handed alpha
Helix 47	AF2	D	144	154	Right-handed alpha
Helix 48	AF3	D	172	184	Right-handed alpha
Helix 49	AF4	D	205	220	Right-handed alpha
Helix 50	AF5	D	234	245	Right-handed alpha
Helix 51	AF6	D	250	257	Right-handed alpha
Helix 52	AF7	D	353	356	Right-handed 310
Helix 53	AF8	D	493	498	Right-handed alpha
Helix 54	AF9	D	524	528	Right-handed 310
Helix 55	AG1	D	533	548	Right-handed alpha
Helix 56	AG2	D	564	571	Right-handed 310
Helix 57	AG3	D	723	730	Right-handed alpha

There are 28 sheets in PDB entry 5IW7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	123	128	first strand
Strand 2	A	133	138	anti-parallel
Strand 3	A	84	90	parallel
Strand 4	A	157	162	parallel
Strand 5	A	188	192	parallel
Strand 6	A	227	228	parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	263	268	first strand
Strand 2	A	273	284	anti-parallel
Strand 3	A	257	260	anti-parallel
Strand 4	A	580	583	anti-parallel
Strand 5	A	293	295	anti-parallel
Strand 6	A	299	301	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	263	268	first strand
Strand 2	A	273	284	anti-parallel
Strand 3	A	556	564	anti-parallel
Strand 4	A	303	309	anti-parallel
Strand 5	A	336	338	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	358	359	first strand
Strand 2	B	530	531	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	374	375	first strand
Strand 2	A	503	504	parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	485	486	first strand
Strand 2	A	696	705	parallel
Strand 3	A	769	777	anti-parallel
Strand 4	A	735	737	anti-parallel
Strand 5	A	742	748	anti-parallel
Strand 6	A	755	759	anti-parallel
Strand 7	A	715	717	anti-parallel
Strand 8	A	707	710	anti-parallel

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There are 11 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	485	486	first strand
Strand 2	A	696	705	parallel
Strand 3	A	639	643	parallel
Strand 4	A	628	631	anti-parallel
Strand 5	A	652	659	anti-parallel
Strand 6	A	591	600	anti-parallel
Strand 7	A	680	690	anti-parallel
Strand 8	A	666	672	anti-parallel
Strand 9	A	614	618	anti-parallel
Strand 10	A	621	625	anti-parallel
Strand 11	A	783	784	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	530	531	first strand
Strand 2	B	358	359	parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	123	128	first strand
Strand 2	B	133	138	anti-parallel
Strand 3	B	84	90	parallel
Strand 4	B	157	162	parallel
Strand 5	B	188	192	parallel
Strand 6	B	227	228	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	257	260	first strand
Strand 2	B	580	583	anti-parallel
Strand 3	B	293	295	anti-parallel
Strand 4	B	299	301	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	263	268	first strand
Strand 2	B	273	281	anti-parallel
Strand 3	B	556	564	anti-parallel
Strand 4	B	303	309	anti-parallel
Strand 5	B	336	338	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	485	486	first strand
Strand 2	B	702	705	parallel
Strand 3	B	769	771	anti-parallel
Strand 4	B	735	737	anti-parallel
Strand 5	B	742	747	anti-parallel
Strand 6	B	755	759	anti-parallel

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There are 11 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	774	777	first strand
Strand 2	B	696	700	anti-parallel
Strand 3	B	639	643	parallel
Strand 4	B	628	631	anti-parallel
Strand 5	B	652	659	anti-parallel
Strand 6	B	591	600	anti-parallel
Strand 7	B	680	691	anti-parallel
Strand 8	B	666	672	anti-parallel
Strand 9	B	614	618	anti-parallel
Strand 10	B	621	625	anti-parallel
Strand 11	B	783	784	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	708	709	first strand
Strand 2	B	715	716	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	123	127	first strand
Strand 2	C	134	138	anti-parallel
Strand 3	C	84	90	parallel
Strand 4	C	157	162	parallel
Strand 5	C	188	192	parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	258	260	first strand
Strand 2	C	580	583	anti-parallel
Strand 3	C	293	295	anti-parallel
Strand 4	C	299	301	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	263	270	first strand
Strand 2	C	273	281	anti-parallel
Strand 3	C	556	563	anti-parallel
Strand 4	C	303	309	anti-parallel
Strand 5	C	336	338	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	358	359	first strand
Strand 2	D	530	531	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	374	375	first strand
Strand 2	C	503	504	parallel

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There are 17 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	485	486	first strand
Strand 2	C	783	784	first strand
Strand 3	C	714	718	first strand
Strand 4	C	754	759	anti-parallel
Strand 5	C	742	748	anti-parallel
Strand 6	C	735	737	anti-parallel
Strand 7	C	769	777	anti-parallel
Strand 8	C	696	711	anti-parallel
Strand 9	C	639	643	parallel
Strand 10	C	628	630	anti-parallel
Strand 11	C	652	659	anti-parallel
Strand 12	C	591	600	anti-parallel
Strand 13	C	680	688	anti-parallel
Strand 14	C	666	672	anti-parallel
Strand 15	C	614	618	anti-parallel
Strand 16	C	621	625	anti-parallel
Strand 17	C	783	784	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	530	531	first strand
Strand 2	D	358	359	parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	123	128	first strand
Strand 2	D	133	138	anti-parallel
Strand 3	D	84	90	parallel
Strand 4	D	157	161	parallel
Strand 5	D	188	190	parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	258	260	first strand
Strand 2	D	580	583	anti-parallel
Strand 3	D	293	295	anti-parallel
Strand 4	D	299	301	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	263	267	first strand
Strand 2	D	275	281	anti-parallel
Strand 3	D	556	562	anti-parallel
Strand 4	D	303	307	anti-parallel
Strand 5	D	337	338	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	374	375	first strand
Strand 2	D	503	504	parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	485	486	first strand
Strand 2	D	696	705	parallel
Strand 3	D	769	777	anti-parallel
Strand 4	D	735	737	anti-parallel
Strand 5	D	742	743	anti-parallel

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There are 11 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	485	486	first strand
Strand 2	D	696	705	parallel
Strand 3	D	639	643	parallel
Strand 4	D	628	630	anti-parallel
Strand 5	D	652	659	anti-parallel
Strand 6	D	591	600	anti-parallel
Strand 7	D	684	690	anti-parallel
Strand 8	D	666	670	anti-parallel
Strand 9	D	614	618	anti-parallel
Strand 10	D	621	625	anti-parallel
Strand 11	D	783	784	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	716	717	first strand
Strand 2	D	755	757	anti-parallel
Strand 3	D	745	748	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5IW7

Analysis of interatomic Contacts of Structural Units in PDB entry:
5IW7