Analysis of interatomic Contacts of Structural Units in PDB entry:
5IWG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5IWG entry

There are 3 chains in PDB entry 5IWG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 12PRO 379
B
 LYS 14PRO 379
C
 LYS 14PRO 379
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 51 helices in PDB entry 5IWG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
23 27Right-handed 310
Helix 2
AA2
A
37 50Right-handed alpha
Helix 3
AA3
A
51 56Right-handed 310
Helix 4
AA4
A
65 70Right-handed alpha
Helix 5
AA5
A
74 84Right-handed alpha
Helix 6
AA6
A
85 91Right-handed 310
Helix 7
AA7
A
92 99Right-handed alpha
Helix 8
AA8
A
110 131Right-handed alpha
Helix 9
AA9
A
159 169Right-handed alpha
Helix 10
AB1
A
185 192Right-handed alpha
Helix 11
AB2
A
221 225Right-handed 310
Helix 12
AB3
A
238 258Right-handed alpha
Helix 13
AB4
A
267 271Right-handed 310
Helix 14
AB5
A
282 296Right-handed alpha
Helix 15
AB6
A
309 325Right-handed alpha
Helix 16
AB7
A
338 343Right-handed 310
Helix 17
AB8
A
360 376Right-handed alpha
Helix 18
AB9
B
23 27Right-handed 310
Helix 19
AC1
B
37 50Right-handed alpha
Helix 20
AC2
B
51 56Right-handed 310
Helix 21
AC3
B
65 70Right-handed alpha
Helix 22
AC4
B
74 84Right-handed alpha
Helix 23
AC5
B
85 91Right-handed 310
Helix 24
AC6
B
92 100Right-handed alpha
Helix 25
AC7
B
110 131Right-handed alpha
Helix 26
AC8
B
159 169Right-handed alpha
Helix 27
AC9
B
185 192Right-handed alpha
Helix 28
AD1
B
221 225Right-handed 310
Helix 29
AD2
B
238 258Right-handed alpha
Helix 30
AD3
B
267 271Right-handed 310
Helix 31
AD4
B
282 295Right-handed alpha
Helix 32
AD5
B
309 325Right-handed alpha
Helix 33
AD6
B
338 343Right-handed 310
Helix 34
AD7
B
360 376Right-handed alpha
Helix 35
AD8
C
23 27Right-handed 310
Helix 36
AD9
C
37 50Right-handed alpha
Helix 37
AE1
C
51 56Right-handed 310
Helix 38
AE2
C
65 70Right-handed alpha
Helix 39
AE3
C
74 84Right-handed alpha
Helix 40
AE4
C
85 89Right-handed 310
Helix 41
AE5
C
92 100Right-handed alpha
Helix 42
AE6
C
110 131Right-handed alpha
Helix 43
AE7
C
159 169Right-handed alpha
Helix 44
AE8
C
185 192Right-handed alpha
Helix 45
AE9
C
221 225Right-handed 310
Helix 46
AF1
C
238 258Right-handed alpha
Helix 47
AF2
C
267 271Right-handed 310
Helix 48
AF3
C
282 295Right-handed alpha
Helix 49
AF4
C
309 325Right-handed alpha
Helix 50
AF5
C
338 343Right-handed 310
Helix 51
AF6
C
360 376Right-handed alpha
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There are 3 sheets in PDB entry 5IWG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 59first strand
Strand 2
A
16 19parallel
Strand 3
A
136 139parallel
Strand 4
A
300 303parallel
Strand 5
A
261 265parallel
Strand 6
A
175 179parallel
Strand 7
A
198 205parallel
Strand 8
A
228 233parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 59first strand
Strand 2
B
16 19parallel
Strand 3
B
136 139parallel
Strand 4
B
300 303parallel
Strand 5
B
261 265parallel
Strand 6
B
175 179parallel
Strand 7
B
198 205parallel
Strand 8
B
228 233parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
57 59first strand
Strand 2
C
16 19parallel
Strand 3
C
136 139parallel
Strand 4
C
300 303parallel
Strand 5
C
261 265parallel
Strand 6
C
175 179parallel
Strand 7
C
198 205parallel
Strand 8
C
228 233parallel
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