Analysis of interatomic Contacts of Structural Units in PDB entry:
5IWP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5IWP entry

There is 1 chain in PDB entry 5IWP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 27ASP 637
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 27 helices in PDB entry 5IWP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 47Right-handed alpha
Helix 2
AA2
A
47 56Right-handed alpha
Helix 3
AA3
A
57 66Right-handed alpha
Helix 4
AA4
A
81 89Right-handed alpha
Helix 5
AA5
A
91 102Right-handed alpha
Helix 6
AA6
A
103 107Right-handed 310
Helix 7
AA7
A
119 127Right-handed alpha
Helix 8
AA8
A
129 140Right-handed alpha
Helix 9
AA9
A
165 174Right-handed alpha
Helix 10
AB1
A
175 185Right-handed alpha
Helix 11
AB2
A
198 205Right-handed alpha
Helix 12
AB3
A
208 222Right-handed alpha
Helix 13
AB4
A
230 234Right-handed 310
Helix 14
AB5
A
241 250Right-handed alpha
Helix 15
AB6
A
251 261Right-handed alpha
Helix 16
AB7
A
290 297Right-handed alpha
Helix 17
AB8
A
300 309Right-handed 310
Helix 18
AB9
A
312 322Right-handed alpha
Helix 19
AC1
A
323 348Right-handed alpha
Helix 20
AC2
A
380 407Right-handed alpha
Helix 21
AC3
A
423 442Right-handed alpha
Helix 22
AC4
A
449 462Right-handed alpha
Helix 23
AC5
A
464 470Right-handed 310
Helix 24
AC6
A
484 513Right-handed alpha
Helix 25
AC7
A
524 537Right-handed alpha
Helix 26
AC8
A
553 578Right-handed alpha
Helix 27
AC9
A
583 607Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 5IWP.

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
263 269first strand
Strand 2
A
272 277anti-parallel
Strand 3
A
628 635anti-parallel
Strand 4
A
617 618anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il