Analysis of interatomic Contacts of Structural Units in PDB entry:
5IWT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5IWT entry

There is 1 chain in PDB entry 5IWT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLU 27ASP 637
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 28 helices in PDB entry 5IWT. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
29 47Right-handed alpha
Helix 2
AA2
A
47 55Right-handed alpha
Helix 3
AA3
A
57 66Right-handed alpha
Helix 4
AA4
A
81 89Right-handed alpha
Helix 5
AA5
A
91 101Right-handed alpha
Helix 6
AA6
A
102 106Right-handed 310
Helix 7
AA7
A
119 127Right-handed alpha
Helix 8
AA8
A
129 140Right-handed alpha
Helix 9
AA9
A
165 173Right-handed alpha
Helix 10
AB1
A
175 184Right-handed alpha
Helix 11
AB2
A
198 205Right-handed alpha
Helix 12
AB3
A
208 222Right-handed alpha
Helix 13
AB4
A
230 234Right-handed 310
Helix 14
AB5
A
241 250Right-handed alpha
Helix 15
AB6
A
251 260Right-handed alpha
Helix 16
AB7
A
290 297Right-handed alpha
Helix 17
AB8
A
300 307Right-handed 310
Helix 18
AB9
A
312 322Right-handed alpha
Helix 19
AC1
A
323 348Right-handed alpha
Helix 20
AC2
A
356 360Right-handed 310
Helix 21
AC3
A
380 407Right-handed alpha
Helix 22
AC4
A
423 442Right-handed alpha
Helix 23
AC5
A
450 462Right-handed alpha
Helix 24
AC6
A
464 470Right-handed 310
Helix 25
AC7
A
481 511Right-handed alpha
Helix 26
AC8
A
524 536Right-handed alpha
Helix 27
AC9
A
553 578Right-handed alpha
Helix 28
AD1
A
583 607Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 5IWT.

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
263 269first strand
Strand 2
A
272 277anti-parallel
Strand 3
A
628 632anti-parallel
Strand 4
A
617 618anti-parallel
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il