Analysis of interatomic Contacts of Structural Units in PDB entry:
5IWW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5IWW entry

There are 4 chains in PDB entry 5IWW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 79THR 188
B
 THR 79THR 188
C
 ILE 80SER 187
D
 PRO 15GLU 314
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 5IWW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
103 120Right-handed alpha
Helix 2
AA2
A
121 128Right-handed alpha
Helix 3
AA3
A
145 150Right-handed alpha
Helix 4
AA4
A
151 153Right-handed 310
Helix 5
AA5
B
103 120Right-handed alpha
Helix 6
AA6
B
121 128Right-handed alpha
Helix 7
AA7
B
145 151Right-handed alpha
Helix 8
AA8
C
103 120Right-handed alpha
Helix 9
AA9
C
121 128Right-handed alpha
Helix 10
AB1
C
145 150Right-handed alpha
Helix 11
AB2
C
151 153Right-handed 310
Helix 12
AB3
D
16 30Right-handed alpha
Helix 13
AB4
D
32 46Right-handed alpha
Helix 14
AB5
D
51 66Right-handed alpha
Helix 15
AB6
D
67 81Right-handed alpha
Helix 16
AB7
D
86 100Right-handed alpha
Helix 17
AB8
D
102 112Right-handed alpha
Helix 18
AB9
D
117 131Right-handed alpha
Helix 19
AC1
D
133 147Right-handed alpha
Helix 20
AC2
D
152 167Right-handed alpha
Helix 21
AC3
D
168 182Right-handed alpha
Helix 22
AC4
D
187 201Right-handed alpha
Helix 23
AC5
D
203 214Right-handed alpha
Helix 24
AC6
D
218 232Right-handed alpha
Helix 25
AC7
D
234 248Right-handed alpha
Helix 26
AC8
D
253 265Right-handed alpha
Helix 27
AC9
D
269 283Right-handed alpha
Helix 28
AD1
D
288 302Right-handed alpha
Helix 29
AD2
D
304 313Right-handed alpha
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There are 3 sheets in PDB entry 5IWW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 163first strand
Strand 2
A
89 94anti-parallel
Strand 3
A
138 143anti-parallel
Strand 4
A
129 134anti-parallel
Strand 5
A
177 180anti-parallel
Strand 6
A
183 185anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
158 163first strand
Strand 2
B
90 94anti-parallel
Strand 3
B
139 142anti-parallel
Strand 4
B
129 133anti-parallel
Strand 5
B
177 180anti-parallel
Strand 6
B
183 185anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
158 163first strand
Strand 2
C
89 94anti-parallel
Strand 3
C
139 143anti-parallel
Strand 4
C
129 133anti-parallel
Strand 5
C
177 179anti-parallel
Strand 6
C
184 185anti-parallel
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