Analysis of interatomic Contacts of Structural Units in PDB entry:
5IWZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5IWZ entry

There is 1 chain in PDB entry 5IWZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1HIS 394
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 5IWZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 8Right-handed 310
Helix 2
AA2
A
9 21Right-handed alpha
Helix 3
AA3
A
23 30Right-handed alpha
Helix 4
AA4
A
45 61Right-handed alpha
Helix 5
AA5
A
62 77Right-handed alpha
Helix 6
AA6
A
87 95Right-handed alpha
Helix 7
AA7
A
95 106Right-handed alpha
Helix 8
AA8
A
107 113Right-handed alpha
Helix 9
AA9
A
120 139Right-handed alpha
Helix 10
AB1
A
140 161Right-handed alpha
Helix 11
AB2
A
165 183Right-handed alpha
Helix 12
AB3
A
194 210Right-handed alpha
Helix 13
AB4
A
212 227Right-handed alpha
Helix 14
AB5
A
228 240Right-handed alpha
Helix 15
AB6
A
242 251Right-handed alpha
Helix 16
AB7
A
252 255Right-handed 310
Helix 17
AB8
A
256 272Right-handed alpha
Helix 18
AB9
A
273 276Right-handed 310
Helix 19
AC1
A
379 388Right-handed alpha
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There are 3 sheets in PDB entry 5IWZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 42first strand
Strand 2
A
80 82parallel
Strand 3
A
85 86anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
278 282first strand
Strand 2
A
305 309anti-parallel
Strand 3
A
314 317anti-parallel
Strand 4
A
331 334anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
291 292first strand
Strand 2
A
285 288anti-parallel
Strand 3
A
365 375anti-parallel
Strand 4
A
349 362anti-parallel
Strand 5
A
338 346anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il