Analysis of interatomic Contacts of Structural Units in PDB entry:
5IX1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5IX1 entry

There are 6 chains in PDB entry 5IX1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 8GLU 455
B
 GLY 8ASP 454
P
 ALA 1THR 3
P
 GLN 5LYS 9
Q
 ALA 1THR 3
Q
 GLN 5SER 10
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 5IX1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 22Right-handed alpha
Helix 2
AA2
A
28 42Right-handed alpha
Helix 3
AA3
A
73 81Right-handed alpha
Helix 4
AA4
A
102 111Right-handed alpha
Helix 5
AA5
A
132 138Right-handed alpha
Helix 6
AA6
A
158 173Right-handed alpha
Helix 7
AA7
A
177 187Right-handed alpha
Helix 8
AA8
A
245 250Right-handed alpha
Helix 9
AA9
A
250 258Right-handed alpha
Helix 10
AB1
A
364 386Right-handed alpha
Helix 11
AB2
A
434 438Right-handed 310
Helix 12
AB3
A
440 444Right-handed 310
Helix 13
AB4
B
17 22Right-handed alpha
Helix 14
AB5
B
28 42Right-handed alpha
Helix 15
AB6
B
73 81Right-handed alpha
Helix 16
AB7
B
102 111Right-handed alpha
Helix 17
AB8
B
132 138Right-handed alpha
Helix 18
AB9
B
158 173Right-handed alpha
Helix 19
AC1
B
177 187Right-handed alpha
Helix 20
AC2
B
245 250Right-handed alpha
Helix 21
AC3
B
250 258Right-handed alpha
Helix 22
AC4
B
331 336Right-handed alpha
Helix 23
AC5
B
364 385Right-handed alpha
Helix 24
AC6
B
434 438Right-handed 310
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There are 7 sheets in PDB entry 5IX1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
156 157first strand
Strand 2
A
147 151anti-parallel
Strand 3
A
124 131anti-parallel
Strand 4
A
112 121anti-parallel
Strand 5
A
192 201anti-parallel
Strand 6
A
60 67anti-parallel
Strand 7
A
49 57anti-parallel
Strand 8
A
265 268parallel
Strand 9
A
271 272anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
282 290first strand
Strand 2
A
299 306anti-parallel
Strand 3
A
343 348anti-parallel
Strand 4
A
314 319parallel
Strand 5
A
322 328anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
419 422first strand
Strand 2
A
408 412anti-parallel
Strand 3
P
3 6anti-parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
156 157first strand
Strand 2
B
147 151anti-parallel
Strand 3
B
124 131anti-parallel
Strand 4
B
112 121anti-parallel
Strand 5
B
192 201anti-parallel
Strand 6
B
60 67anti-parallel
Strand 7
B
49 57anti-parallel
Strand 8
B
265 268parallel
Strand 9
B
271 272anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
203 204first strand
Strand 2
B
207 208anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
282 290first strand
Strand 2
B
299 306anti-parallel
Strand 3
B
343 348anti-parallel
Strand 4
B
314 319parallel
Strand 5
B
322 328anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
419 422first strand
Strand 2
B
408 412anti-parallel
Strand 3
Q
3 6anti-parallel
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