Analysis of interatomic Contacts of Structural Units in PDB entry:
5IXK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5IXK entry

There are 2 chains in PDB entry 5IXK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 269GLN 487
B
 THR 268GLN 487
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 5IXK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
269 285Right-handed alpha
Helix 2
AA2
A
288 295Right-handed alpha
Helix 3
AA3
A
296 298Right-handed 310
Helix 4
AA4
A
301 310Right-handed alpha
Helix 5
AA5
A
312 338Right-handed alpha
Helix 6
AA6
A
345 365Right-handed alpha
Helix 7
AA7
A
384 392Right-handed 310
Helix 8
AA8
A
393 409Right-handed alpha
Helix 9
AA9
A
413 426Right-handed alpha
Helix 10
AB1
A
435 457Right-handed alpha
Helix 11
AB2
A
458 464Right-handed 310
Helix 12
AB3
A
468 476Right-handed alpha
Helix 13
AB4
A
477 481Right-handed 310
Helix 14
AB5
A
482 487Right-handed 310
Helix 15
AB6
B
269 284Right-handed alpha
Helix 16
AB7
B
288 295Right-handed alpha
Helix 17
AB8
B
296 298Right-handed 310
Helix 18
AB9
B
301 310Right-handed alpha
Helix 19
AC1
B
312 338Right-handed alpha
Helix 20
AC2
B
340 344Right-handed 310
Helix 21
AC3
B
345 366Right-handed alpha
Helix 22
AC4
B
384 392Right-handed 310
Helix 23
AC5
B
393 409Right-handed alpha
Helix 24
AC6
B
413 426Right-handed alpha
Helix 25
AC7
B
435 457Right-handed alpha
Helix 26
AC8
B
461 466Right-handed alpha
Helix 27
AC9
B
468 476Right-handed alpha
Helix 28
AD1
B
477 481Right-handed 310
Helix 29
AD2
B
482 487Right-handed 310
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There are 2 sheets in PDB entry 5IXK. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
369 370first strand
Strand 2
A
375 378anti-parallel
Strand 3
A
381 383anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
369 370first strand
Strand 2
B
375 378anti-parallel
Strand 3
B
381 383anti-parallel
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