Analysis of interatomic Contacts of Structural Units in PDB entry:
5IXP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5IXP entry

There is 1 chain in PDB entry 5IXP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 44ASN 436
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 5IXP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
57 68Right-handed alpha
Helix 2
AA2
A
80 95Right-handed alpha
Helix 3
AA3
A
108 114Right-handed alpha
Helix 4
AA4
A
115 119Right-handed 310
Helix 5
AA5
A
121 125Right-handed 310
Helix 6
AA6
A
126 131Right-handed alpha
Helix 7
AA7
A
132 134Right-handed 310
Helix 8
AA8
A
135 142Right-handed alpha
Helix 9
AA9
A
165 171Right-handed alpha
Helix 10
AB1
A
176 182Right-handed alpha
Helix 11
AB2
A
186 201Right-handed alpha
Helix 12
AB3
A
209 219Right-handed alpha
Helix 13
AB4
A
233 236Right-handed 310
Helix 14
AB5
A
237 253Right-handed alpha
Helix 15
AB6
A
263 270Right-handed alpha
Helix 16
AB7
A
283 293Right-handed alpha
Helix 17
AB8
A
294 297Right-handed 310
Helix 18
AB9
A
326 338Right-handed alpha
Helix 19
AC1
A
339 351Right-handed alpha
Helix 20
AC2
A
356 361Right-handed 310
Helix 21
AC3
A
362 367Right-handed alpha
Helix 22
AC4
A
377 388Right-handed alpha
Helix 23
AC5
A
398 415Right-handed alpha
Helix 24
AC6
A
419 436Right-handed alpha
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There are 2 sheets in PDB entry 5IXP. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 77first strand
Strand 2
A
45 51parallel
Strand 3
A
101 105parallel
Strand 4
A
312 319anti-parallel
Strand 5
A
151 164anti-parallel
Strand 6
A
300 303anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
205 207first strand
Strand 2
A
275 281parallel
Strand 3
A
151 164anti-parallel
Strand 4
A
353 354anti-parallel
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