Analysis of interatomic Contacts of Structural Units in PDB entry:
5IY2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5IY2 entry

There are 4 chains in PDB entry 5IY2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 35PHE 83
A
 MET 85ILE 275
B
 GLN 36PHE 83
B
 MET 85ILE 275
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 5IY2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
35 49Right-handed alpha
Helix 2
AA2
A
69 75Right-handed 310
Helix 3
AA3
A
79 82Right-handed 310
Helix 4
AA4
A
83 94Right-handed alpha
Helix 5
AA5
A
112 116Right-handed 310
Helix 6
AA6
A
120 128Right-handed alpha
Helix 7
AA7
A
129 141Right-handed alpha
Helix 8
AA8
A
141 153Right-handed alpha
Helix 9
AA9
A
165 170Right-handed alpha
Helix 10
AB1
A
175 188Right-handed alpha
Helix 11
AB2
A
194 204Right-handed alpha
Helix 12
AB3
A
259 272Right-handed alpha
Helix 13
AB4
B
37 49Right-handed alpha
Helix 14
AB5
B
69 75Right-handed 310
Helix 15
AB6
B
79 81Right-handed 310
Helix 16
AB7
B
82 94Right-handed alpha
Helix 17
AB8
B
112 116Right-handed 310
Helix 18
AB9
B
120 128Right-handed alpha
Helix 19
AC1
B
129 141Right-handed alpha
Helix 20
AC2
B
141 153Right-handed alpha
Helix 21
AC3
B
165 170Right-handed alpha
Helix 22
AC4
B
175 188Right-handed alpha
Helix 23
AC5
B
194 203Right-handed alpha
Helix 24
AC6
B
258 272Right-handed alpha
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There are 2 sheets in PDB entry 5IY2. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 67first strand
Strand 2
A
53 59anti-parallel
Strand 3
A
243 252anti-parallel
Strand 4
A
228 237anti-parallel
Strand 5
A
213 222anti-parallel
Strand 6
A
206 210anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
62 67first strand
Strand 2
B
53 59anti-parallel
Strand 3
B
243 252anti-parallel
Strand 4
B
228 238anti-parallel
Strand 5
B
213 222anti-parallel
Strand 6
B
206 210anti-parallel
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