Analysis of interatomic Contacts of Structural Units in PDB entry:
5IZ3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5IZ3 entry

There are 2 chains in PDB entry 5IZ3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 79VAL 394
B
 GLU 79VAL 393
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 5IZ3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
83 92Right-handed alpha
Helix 2
AA2
A
94 117Right-handed alpha
Helix 3
AA3
A
136 152Right-handed alpha
Helix 4
AA4
A
182 189Right-handed 310
Helix 5
AA5
A
208 212Right-handed 310
Helix 6
AA6
A
266 272Right-handed 310
Helix 7
AA7
A
273 286Right-handed alpha
Helix 8
AA8
A
295 307Right-handed alpha
Helix 9
AA9
A
328 339Right-handed alpha
Helix 10
AB1
A
349 353Right-handed 310
Helix 11
AB2
A
368 381Right-handed alpha
Helix 12
AB3
A
383 390Right-handed alpha
Helix 13
AB4
B
83 92Right-handed alpha
Helix 14
AB5
B
94 117Right-handed alpha
Helix 15
AB6
B
136 152Right-handed alpha
Helix 16
AB7
B
182 189Right-handed 310
Helix 17
AB8
B
210 212Right-handed 310
Helix 18
AB9
B
266 272Right-handed 310
Helix 19
AC1
B
273 286Right-handed alpha
Helix 20
AC2
B
295 307Right-handed alpha
Helix 21
AC3
B
328 339Right-handed alpha
Helix 22
AC4
B
349 352Right-handed 310
Helix 23
AC5
B
368 381Right-handed alpha
Helix 24
AC6
B
383 393Right-handed alpha
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There are 7 sheets in PDB entry 5IZ3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
119 120first strand
Strand 2
A
125 129anti-parallel
Strand 3
A
132 135anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 167first strand
Strand 2
A
154 159anti-parallel
Strand 3
A
173 181parallel
Strand 4
A
192 200anti-parallel
Strand 5
A
214 220anti-parallel
Strand 6
A
224 230anti-parallel
Strand 7
A
236 241anti-parallel
Strand 8
A
247 253anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
289 290first strand
Strand 2
A
257 265parallel
Strand 3
A
308 313parallel
Strand 4
A
364 367anti-parallel
Strand 5
A
342 344anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
119 120first strand
Strand 2
B
125 129anti-parallel
Strand 3
B
132 135anti-parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
162 167first strand
Strand 2
B
154 159anti-parallel
Strand 3
B
173 181parallel
Strand 4
B
192 200anti-parallel
Strand 5
B
214 220anti-parallel
Strand 6
B
224 230anti-parallel
Strand 7
B
236 241anti-parallel
Strand 8
B
247 253anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
207 208first strand
Strand 2
B
354 355anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
289 290first strand
Strand 2
B
257 265parallel
Strand 3
B
308 313parallel
Strand 4
B
364 367anti-parallel
Strand 5
B
342 344anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il