Analysis of interatomic Contacts of Structural Units in PDB entry:
5IZ7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5IZ7 entry

There are 6 chains in PDB entry 5IZ7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 1	ALA 504
C	ILE 1	ALA 504
D	ALA 1	SER 75
B	ILE 1	ALA 504
E	ALA 1	SER 75
F	ALA 1	SER 75

There are 42 helices in PDB entry 5IZ7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	82	87	Right-handed 310
Helix 2	AA2	A	215	220	Right-handed alpha
Helix 3	AA3	A	261	269	Right-handed alpha
Helix 4	AA4	A	322	324	Right-handed 310
Helix 5	AA5	A	409	415	Right-handed alpha
Helix 6	AA6	A	418	423	Right-handed alpha
Helix 7	AA7	A	440	445	Right-handed alpha
Helix 8	AA8	A	447	456	Right-handed alpha
Helix 9	AA9	A	461	478	Right-handed alpha
Helix 10	AB1	A	486	501	Right-handed alpha
Helix 11	AB2	C	82	87	Right-handed 310
Helix 12	AB3	C	100	104	Right-handed 310
Helix 13	AB4	C	214	219	Right-handed alpha
Helix 14	AB5	C	261	267	Right-handed alpha
Helix 15	AB6	C	405	409	Right-handed 310
Helix 16	AB7	C	415	417	Right-handed 310
Helix 17	AB8	C	418	423	Right-handed alpha
Helix 18	AB9	C	438	443	Right-handed alpha
Helix 19	AC1	C	449	457	Right-handed alpha
Helix 20	AC2	C	461	476	Right-handed alpha
Helix 21	AC3	C	483	500	Right-handed alpha
Helix 22	AC4	D	20	35	Right-handed alpha
Helix 23	AC5	D	45	53	Right-handed alpha
Helix 24	AC6	D	56	69	Right-handed alpha
Helix 25	AC7	B	155	160	Right-handed alpha
Helix 26	AC8	B	197	199	Right-handed 310
Helix 27	AC9	B	215	221	Right-handed alpha
Helix 28	AD1	B	301	305	Right-handed 310
Helix 29	AD2	B	406	411	Right-handed alpha
Helix 30	AD3	B	436	446	Right-handed alpha
Helix 31	AD4	B	451	456	Right-handed alpha
Helix 32	AD5	B	461	478	Right-handed alpha
Helix 33	AD6	B	485	504	Right-handed alpha
Helix 34	AD7	E	24	34	Right-handed alpha
Helix 35	AD8	E	41	52	Right-handed alpha
Helix 36	AD9	E	59	71	Right-handed alpha
Helix 37	AE1	E	72	74	Right-handed 310
Helix 38	AE2	F	6	10	Right-handed 310
Helix 39	AE3	F	23	37	Right-handed alpha
Helix 40	AE4	F	38	40	Right-handed 310
Helix 41	AE5	F	41	52	Right-handed alpha
Helix 42	AE6	F	60	68	Right-handed alpha

There are 31 sheets in PDB entry 5IZ7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	10	11	first strand
Strand 2	A	31	33	parallel
Strand 3	A	41	44	anti-parallel
Strand 4	A	140	142	anti-parallel
Strand 5	A	164	166	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	135	137	first strand
Strand 2	A	48	50	anti-parallel
Strand 3	A	282	284	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	55	63	first strand
Strand 2	A	121	128	anti-parallel
Strand 3	A	201	206	anti-parallel
Strand 4	A	209	214	anti-parallel
Strand 5	A	273	275	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	71	73	first strand
Strand 2	A	112	118	anti-parallel
Strand 3	A	90	96	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	175	180	first strand
Strand 2	A	184	189	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	245	247	first strand
Strand 2	A	253	255	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	313	314	first strand
Strand 2	A	330	332	anti-parallel
Strand 3	A	372	373	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	320	321	first strand
Strand 2	A	325	326	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	383	386	first strand
Strand 2	A	399	402	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	10	12	first strand
Strand 2	C	31	35	parallel
Strand 3	C	38	47	anti-parallel
Strand 4	C	138	143	anti-parallel
Strand 5	C	165	166	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	23	24	first strand
Strand 2	C	290	291	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	58	60	first strand
Strand 2	C	124	129	anti-parallel
Strand 3	C	202	206	anti-parallel
Strand 4	C	209	213	anti-parallel
Strand 5	C	273	277	anti-parallel
Strand 6	C	282	283	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	68	72	first strand
Strand 2	C	113	118	anti-parallel
Strand 3	C	90	92	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	98	99	first strand
Strand 2	C	109	110	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	187	188	first strand
Strand 2	C	293	294	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	244	245	first strand
Strand 2	C	255	256	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	329	330	first strand
Strand 2	C	374	375	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	339	340	first strand
Strand 2	C	364	365	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	343	344	first strand
Strand 2	C	388	389	anti-parallel
Strand 3	C	396	397	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	357	358	first strand
Strand 2	C	378	379	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	384	385	first strand
Strand 2	C	400	401	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	9	13	first strand
Strand 2	B	30	34	parallel
Strand 3	B	41	47	anti-parallel
Strand 4	B	138	143	anti-parallel
Strand 5	B	165	166	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	24	26	first strand
Strand 2	B	288	290	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	60	first strand
Strand 2	B	124	126	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	63	64	first strand
Strand 2	B	120	121	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	69	73	first strand
Strand 2	B	112	118	anti-parallel
Strand 3	B	90	95	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	201	203	first strand
Strand 2	B	212	214	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	243	246	first strand
Strand 2	B	254	257	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	275	277	first strand
Strand 2	B	282	284	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	312	321	first strand
Strand 2	B	325	332	anti-parallel
Strand 3	B	374	376	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	383	385	first strand
Strand 2	B	400	402	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5IZ7

Analysis of interatomic Contacts of Structural Units in PDB entry:
5IZ7